RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SAMM50Q9Y512 469 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 FLT1P17948 1338 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 DOCK3Q8IZD9 2030 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 A0A1W2PQ45 241 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-239ENST00000556315 A0A1W2PQY0 241 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 SCAMP3O14828 347 aaKnown RBP5.87□□□□□ -1.47
ATXN3-239ENST00000556315 PGK1P00558 417 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 RLBP1P12271 317 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 FCER1AP12319 257 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 ABCB5Q2M3G0 1257 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 CERKLQ49MI3 558 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-239ENST00000556315 TMEM31Q5JXX7 168 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 MEI1Q5TIA1 1274 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 TTC6Q86TZ1 520 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 TMEM199Q8N511 208 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 MB21D1Q8N884 522 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 ACER1Q8TDN7 264 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 SSH1Q8WYL5 1049 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 HERVK_113Q902F9 699 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 MAML3Q96JK9 1138 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 NECAB3Q96P71 396 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-239ENST00000556315 NOC4LQ9BVI4 516 aaKnown RBP5.87□□□□□ -1.47
ATXN3-239ENST00000556315 EPHX3Q9H6B9 360 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 SLC28A3Q9HAS3 691 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 STARD7Q9NQZ5 370 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 METTL5Q9NRN9 209 aaKnown RBP5.87□□□□□ -1.47
ATXN3-239ENST00000556315 SAP30BPQ9UHR5 308 aaKnown RBP5.87□□□□□ -1.47
ATXN3-239ENST00000556315 SERPINB13Q9UIV8 391 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 SLC5A6Q9Y289 635 aa5.87□□□□□ -1.47
ATXN3-239ENST00000556315 DIS3Q9Y2L1 958 aaKnown RBP5.87□□□□□ -1.47
ATXN3-239ENST00000556315 ELP1O95163 1332 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 MROH7Q68CQ1 1323 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 ERC2O15083 957 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 TMPRSS2O15393 492 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 PAPLNO95428 1278 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 SLC25A27O95847 323 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 FGBP02675 491 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 AKR1A1P14550 325 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 MCAMP43121 646 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 CDK7P50613 346 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 ACLYP53396 1101 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 PSRC1Q6PGN9 363 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-239ENST00000556315 ZNF365Q70YC5 407 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 SPRED2Q7Z698 418 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 CERS3Q8IU89 383 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 STK11IPQ8N1F8 1099 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 KLHDC9Q8NEP7 349 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 MTIF3Q9H2K0 278 aaKnown RBP5.86□□□□□ -1.47
ATXN3-239ENST00000556315 CRIM1Q9NZV1 1036 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 TBX21Q9UL17 535 aa5.86□□□□□ -1.47
ATXN3-239ENST00000556315 A0A1B0GUL6 1792 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ARVCFO00192 962 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 FBXO24O75426 580 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 C8AP07357 584 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ACRP10323 421 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 CSF2RAP15509 400 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 LIG1P18858 919 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 POU3F3P20264 500 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ZNF76P36508 570 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 DYNLL1P63167 89 aaKnown RBP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 HNRNPUQ00839 825 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 G3BP1Q13283 466 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 PLS1Q14651 629 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 KCTD2Q14681 263 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 KCNA10Q16322 511 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ZNF792Q3KQV3 632 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 CYP27C1Q4G0S4 372 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 CCDC158Q5M9N0 1113 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ZNF574Q6ZN55 896 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 HS2ST1Q7LGA3 356 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ADGRA1Q86SQ6 560 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 PCSK9Q8NBP7 692 aaKnown RBP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 MISP3Q96FF7 219 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 WDR89Q96FK6 387 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 GLT1D1Q96MS3 346 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 FANCD2OSQ96PS1 177 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 MMP19Q99542 508 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 EMILIN2Q9BXX0 1053 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 NKX2-4Q9H2Z4 354 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 CCDC86Q9H6F5 360 aaKnown RBP5.85□□□□□ -1.47
ATXN3-239ENST00000556315 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 FAM184BQ9ULE4 1060 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 COG5Q9UP83 839 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 CNPY2Q9Y2B0 182 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 PCDHGC5Q9Y5F6 944 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 AK9Q5TCS8 1911 aa5.85□□□□□ -1.47
ATXN3-239ENST00000556315 ZNF521Q96K83 1311 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 A0A1W2PRG0 241 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 ENC1O14682 589 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 TLR3O15455 904 aaKnown RBP5.84□□□□□ -1.47
ATXN3-239ENST00000556315 ZNF862O60290 1169 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 DUSP11O75319 330 aaKnown RBP5.84□□□□□ -1.47
ATXN3-239ENST00000556315 FLOT1O75955 427 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 GNAI3P08754 354 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms