RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 NFASCO94856 1347 aa14.35□□□□□ -0.11
APEX1-213ENST00000556296 TTC3P53804 2025 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 COL4A6Q14031 1691 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 GRM6O15303 877 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 ZSCAN22P10073 491 aaPredicted RBP14.34□□□□□ -0.11
APEX1-213ENST00000556296 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
APEX1-213ENST00000556296 CD52P31358 61 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 USP11P51784 963 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 NUCB2P80303 420 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 INF2Q27J81 1249 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 CEP55Q53EZ4 464 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 MARCH8Q5T0T0 291 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 NEK8Q86SG6 692 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 TBCKQ8TEA7 893 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
APEX1-213ENST00000556296 ZNF689Q96CS4 500 aaPredicted RBP14.34□□□□□ -0.11
APEX1-213ENST00000556296 PCYT2Q99447 389 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 NAP1L4Q99733 375 aaKnown RBP14.34□□□□□ -0.11
APEX1-213ENST00000556296 CELF4Q9BZC1 486 aaKnown RBP14.34□□□□□ -0.11
APEX1-213ENST00000556296 KCNH6Q9H252 994 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 ZSCAN16Q9H4T2 348 aaPredicted RBP14.34□□□□□ -0.11
APEX1-213ENST00000556296 CIZ1Q9ULV3 898 aaPredicted RBP14.34□□□□□ -0.11
APEX1-213ENST00000556296 PLAGL2Q9UPG8 496 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 WDR81Q562E7 1941 aa14.34□□□□□ -0.11
APEX1-213ENST00000556296 SMIM35A0A1B0GVV1 85 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 POTEB3A0JP26 581 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 BACH1O14867 736 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 HBP1O60381 514 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 CYP3A4P08684 503 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 DDIT3P35638 169 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 NDUFV1P49821 464 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 ACTR2P61160 394 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 KRT76Q01546 638 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 ZP2Q05996 745 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 SMAD4Q13485 552 aaKnown RBP14.33□□□□□ -0.12
APEX1-213ENST00000556296 CTC1Q2NKJ3 1217 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 EARS2Q5JPH6 523 aaKnown RBP14.33□□□□□ -0.12
APEX1-213ENST00000556296 POTEBQ6S5H4 581 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 FERMT3Q86UX7 667 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 CYP2W1Q8TAV3 490 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 CRYGNQ8WXF5 182 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 MFSD14AQ96MC6 490 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 IGFLR1Q9H665 355 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 C11orf16Q9NQ32 467 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 CD207Q9UJ71 328 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 PCDHB7Q9Y5E2 793 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 RALGAPA2Q2PPJ7 1873 aa14.33□□□□□ -0.12
APEX1-213ENST00000556296 MYH9P35579 1960 aaKnown RBP14.33□□□□□ -0.12
APEX1-213ENST00000556296 EVPLQ92817 2033 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 MYO7AQ13402 2215 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 FAM205CA6NFA0 338 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 MEIS1O00470 390 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 GPR182O15218 404 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 BRD1O95696 1058 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 F13A1P00488 732 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 ARP10275 920 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 HYAL1Q12794 435 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 RESTQ13127 1097 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 PKP1Q13835 747 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 PLCB4Q15147 1175 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 SMAD2Q15796 467 aaKnown RBP14.32□□□□□ -0.12
APEX1-213ENST00000556296 RILPL1Q5EBL4 403 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 SPOUT1Q5T280 376 aaKnown RBP14.32□□□□□ -0.12
APEX1-213ENST00000556296 MOXD1Q6UVY6 613 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 AGO3Q9H9G7 860 aaKnown RBP14.32□□□□□ -0.12
APEX1-213ENST00000556296 RC3H2Q9HBD1 1191 aaKnown RBP14.32□□□□□ -0.12
APEX1-213ENST00000556296 AGO4Q9HCK5 861 aaKnown RBP14.32□□□□□ -0.12
APEX1-213ENST00000556296 C1orf112Q9NSG2 853 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 PADI3Q9ULW8 664 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 PCDHB12Q9Y5F1 795 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 IGSF9BQ9UPX0 1349 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 KDM3AQ9Y4C1 1321 aa14.32□□□□□ -0.12
APEX1-213ENST00000556296 DENND3A2RUS2 1198 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 C19orf67A6NJJ6 358 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 SRGAP2BP0DMP2 458 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 GCFC2P16383 781 aaKnown RBP14.31□□□□□ -0.12
APEX1-213ENST00000556296 CIITAP33076 1130 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 UBE3AQ05086 875 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 TMEM62Q0P6H9 643 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 NFX1Q12986 1120 aaKnown RBP14.31□□□□□ -0.12
APEX1-213ENST00000556296 LETM2Q2VYF4 491 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 ZNF484Q5JVG2 852 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 MIS18BP1Q6P0N0 1132 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 MTHFD1LQ6UB35 978 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 NIPA1Q7RTP0 329 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 MICAL1Q8TDZ2 1067 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 ALG13Q9NP73 1137 aaKnown RBP14.31□□□□□ -0.12
APEX1-213ENST00000556296 GINS2Q9Y248 185 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
APEX1-213ENST00000556296 MRPL42Q9Y6G3 142 aaKnown RBP14.31□□□□□ -0.12
APEX1-213ENST00000556296 MBTPS2O43462 519 aa14.3□□□□□ -0.12
APEX1-213ENST00000556296 RPS6KA5O75582 802 aa14.3□□□□□ -0.12
APEX1-213ENST00000556296 CSPG5O95196 566 aa14.3□□□□□ -0.12
APEX1-213ENST00000556296 ATG7O95352 703 aa14.3□□□□□ -0.12
APEX1-213ENST00000556296 KLRC1P26715 233 aa14.3□□□□□ -0.12
APEX1-213ENST00000556296 SARSP49591 514 aaKnown RBP14.3□□□□□ -0.12
APEX1-213ENST00000556296 SETQ01105 290 aaPredicted RBP14.3□□□□□ -0.12
APEX1-213ENST00000556296 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms