RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17■□□□□ 0.31
ACTN1-217ENST00000556203 TLL1O43897 1013 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 GPR32O75388 356 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 CRYBB1P53674 252 aaPredicted RBP17■□□□□ 0.31
ACTN1-217ENST00000556203 PAK2Q13177 524 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 PTGDRQ13258 359 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 DRP2Q13474 957 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 TMEM266Q2M3C6 531 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 FAM117BQ6P1L5 589 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 OTUD6AQ7L8S5 288 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 ZNF579Q8NAF0 562 aaKnown RBP17■□□□□ 0.31
ACTN1-217ENST00000556203 TMEM40Q8WWA1 233 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 GUCD1Q96NT3 240 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 ZBED2Q9BTP6 218 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 SLC28A3Q9HAS3 691 aa17■□□□□ 0.31
ACTN1-217ENST00000556203 IGKV6-21A0A0C4DH24 114 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 VPS37CA5D8V6 355 aaPredicted RBP16.99■□□□□ 0.31
ACTN1-217ENST00000556203 ZBTB39O15060 712 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 MAFO75444 373 aaPredicted RBP16.99■□□□□ 0.31
ACTN1-217ENST00000556203 LYPLA2O95372 231 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 GJB5O95377 273 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 CA3P07451 260 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 PDCP20941 246 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 NLRP11P59045 1033 aaKnown RBP16.99■□□□□ 0.31
ACTN1-217ENST00000556203 NFX1Q12986 1120 aaKnown RBP16.99■□□□□ 0.31
ACTN1-217ENST00000556203 PPP2R2DQ66LE6 453 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 HSCBQ8IWL3 235 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 ZNF668Q96K58 619 aaPredicted RBP16.99■□□□□ 0.31
ACTN1-217ENST00000556203 JPH2Q9BR39 696 aaPredicted RBP16.99■□□□□ 0.31
ACTN1-217ENST00000556203 ADAMTS10Q9H324 1103 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.99■□□□□ 0.31
ACTN1-217ENST00000556203 PADI3Q9ULW8 664 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 NOC2LQ9Y3T9 749 aaKnown RBP16.99■□□□□ 0.31
ACTN1-217ENST00000556203 PPME1Q9Y570 386 aa16.99■□□□□ 0.31
ACTN1-217ENST00000556203 MYH9P35579 1960 aaKnown RBP16.98■□□□□ 0.31
ACTN1-217ENST00000556203 RPS6KA5O75582 802 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 DNM2P50570 870 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.31
ACTN1-217ENST00000556203 POLGP54098 1239 aaPredicted RBP16.98■□□□□ 0.31
ACTN1-217ENST00000556203 GRIN2CQ14957 1233 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 XKR9Q5GH70 373 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 ZNF710Q8N1W2 664 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 ERMNQ8TAM6 284 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 SLC7A3Q8WY07 619 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 SCLT1Q96NL6 688 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 ERVK-5Q9HDB9 667 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 TUFT1Q9NNX1 390 aa16.98■□□□□ 0.31
ACTN1-217ENST00000556203 BMP2KQ9NSY1 1161 aaPredicted RBP16.98■□□□□ 0.31
ACTN1-217ENST00000556203 SUCLA2Q9P2R7 463 aaPredicted RBP16.98■□□□□ 0.31
ACTN1-217ENST00000556203 A0A087WWV3 80 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 LAD1O00515 517 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 ENPP3O14638 875 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 MED24O75448 989 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 RFC5P40937 340 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 GPC3P51654 580 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 CATSPER3Q86XQ3 398 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 NLRP7Q8WX94 980 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 LINC01599Q8WXQ3 324 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 TOP1MTQ969P6 601 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 CDX2Q99626 313 aaPredicted RBP16.97■□□□□ 0.31
ACTN1-217ENST00000556203 RAD9AQ99638 391 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 FTHL17Q9BXU8 183 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 TMX1Q9H3N1 280 aa16.97■□□□□ 0.31
ACTN1-217ENST00000556203 DHX33Q9H6R0 707 aaKnown RBP16.97■□□□□ 0.31
ACTN1-217ENST00000556203 LCHNA4D1U4 455 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 GPR182O15218 404 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 ARHGEF15O94989 841 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 UPP2O95045 317 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 SYT1P21579 422 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 EMC2Q15006 297 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 ODR4Q5SWX8 454 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 HAUS3Q68CZ6 603 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 BRAPQ7Z569 592 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 FAM228AQ86W67 206 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 EXOC8Q8IYI6 725 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 PIGOQ8TEQ8 1089 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 TMEM143Q96AN5 459 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 CCDC43Q96MW1 224 aaKnown RBP16.96■□□□□ 0.31
ACTN1-217ENST00000556203 POLR3CQ9BUI4 534 aaPredicted RBP16.96■□□□□ 0.31
ACTN1-217ENST00000556203 ANKEF1Q9NU02 776 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 ST3GAL5Q9UNP4 418 aa16.96■□□□□ 0.31
ACTN1-217ENST00000556203 SIP14410 1827 aa16.96■□□□□ 0.3
ACTN1-217ENST00000556203 DARSP14868 501 aaKnown RBP16.95■□□□□ 0.3
ACTN1-217ENST00000556203 EIF4BP23588 611 aaKnown RBP16.95■□□□□ 0.3
ACTN1-217ENST00000556203 RPA1P27694 616 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 PRPHP41219 470 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 RARRES1P49788 294 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 ATP2C1P98194 919 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-217ENST00000556203 CDC42EP1Q00587 391 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 IL17AQ16552 155 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 RTN4RL1Q86UN2 441 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-217ENST00000556203 RHPN2Q8IUC4 686 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 MYLIPQ8WY64 445 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 MTRQ99707 1265 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms