RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 VTI1AQ96AJ9 217 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 GMCL1Q96IK5 515 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 WRNIP1Q96S55 665 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
SLIRP-204ENST00000555890 NKX2-4Q9H2Z4 354 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 SH2D4AQ9H788 454 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 JMJD4Q9H9V9 463 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 MUTYHQ9UIF7 546 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ZNF112Q9UJU3 913 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ATP11BQ9Y2G3 1177 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 A0A0G2JMZ2 1700 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 LTBP2Q14767 1821 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 EIF4E1BA6NMX2 242 aaKnown RBP7.67□□□□□ -1.18
SLIRP-204ENST00000555890 TMEM229AB2RXF0 380 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 F5H6K3 240 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 ZBTB5O15062 677 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 ARHGAP6O43182 974 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 GDF11O95390 407 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 HMGCRP04035 888 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 BMP3P12645 472 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 MCM7P33993 719 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 LONP1P36776 959 aaKnown RBP7.67□□□□□ -1.18
SLIRP-204ENST00000555890 TXLNAP40222 546 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 KLRC3Q07444 240 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 HS1BP3Q53T59 392 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 EARS2Q5JPH6 523 aaKnown RBP7.67□□□□□ -1.18
SLIRP-204ENST00000555890 MAP3K21Q5TCX8 1036 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 KCTD1Q719H9 257 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 REXO1Q8N1G1 1221 aaKnown RBP7.67□□□□□ -1.18
SLIRP-204ENST00000555890 HOOK2Q96ED9 719 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 PDLIM2Q96JY6 352 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 CSRNP2Q9H175 543 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 DNAJC25Q9H1X3 360 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 CPVLQ9H3G5 476 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 PRKAG3Q9UGI9 489 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 TECTAO75443 2155 aa7.67□□□□□ -1.18
SLIRP-204ENST00000555890 ATAD5Q96QE3 1844 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 SPTAN1Q13813 2472 aaKnown RBP7.66□□□□□ -1.18
SLIRP-204ENST00000555890 VWA3AA6NCI4 1184 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 SMTNL1A8MU46 457 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 BECN2A8MW95 431 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 POLR2DO15514 142 aaKnown RBP7.66□□□□□ -1.18
SLIRP-204ENST00000555890 SMC2O95347 1197 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 NDUFB10O96000 172 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 MPSTP25325 297 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 PRPHP41219 470 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 NLRP12P59046 1061 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 RAB15P59190 212 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 TPM4P67936 248 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 ZP2Q05996 745 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 IKQ13123 557 aaPredicted RBP7.66□□□□□ -1.18
SLIRP-204ENST00000555890 INF2Q27J81 1249 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 LONRF3Q496Y0 759 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 TTBK2Q6IQ55 1244 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 ALKBH2Q6NS38 261 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 DTHD1Q6ZMT9 781 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 RASGRP2Q7LDG7 609 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 NEK8Q86SG6 692 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 SIAH1Q8IUQ4 282 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 RASGRP4Q8TDF6 673 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 CUL5Q93034 780 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 COA7Q96BR5 231 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 MTMR8Q96EF0 704 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 MTRQ99707 1265 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 NAP1L4Q99733 375 aaKnown RBP7.66□□□□□ -1.18
SLIRP-204ENST00000555890 UBE2ZQ9H832 354 aaPredicted RBP7.66□□□□□ -1.18
SLIRP-204ENST00000555890 CBX8Q9HC52 389 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 RIC8AQ9NPQ8 531 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 GINM1Q9NU53 330 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 KCNK4Q9NYG8 393 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 CCDC39Q9UFE4 941 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 TUBE1Q9UJT0 475 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 ZBTB21Q9ULJ3 1066 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 TMX2Q9Y320 296 aa7.66□□□□□ -1.18
SLIRP-204ENST00000555890 UBR5O95071 2799 aaPredicted RBP7.65□□□□□ -1.18
SLIRP-204ENST00000555890 DSPP15924 2871 aaKnown RBP7.65□□□□□ -1.18
SLIRP-204ENST00000555890 TRIM43BA6NCK2 446 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 TMEM232C9JQI7 657 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 TNPO2O14787 897 aaKnown RBP7.65□□□□□ -1.18
SLIRP-204ENST00000555890 ADCY5O95622 1261 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 LMNAP02545 664 aaKnown RBP7.65□□□□□ -1.18
SLIRP-204ENST00000555890 PTMAP06454 111 aaKnown RBP7.65□□□□□ -1.18
SLIRP-204ENST00000555890 TPM3P06753 285 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 ASNSP08243 561 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 SLURP2P0DP57 97 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 PTPRFP10586 1907 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 SLC16A2P36021 539 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 CAP2P40123 477 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 SCTRP47872 440 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 ERVK-9P63128 1117 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 MAP3K10Q02779 954 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 GRIN1Q05586 938 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 FPGSQ05932 587 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 CDC37Q16543 378 aaPredicted RBP7.65□□□□□ -1.18
SLIRP-204ENST00000555890 LETM2Q2VYF4 491 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 SPECC1Q5M775 1068 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 SYDE2Q5VT97 1194 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 JAKMIP3Q5VZ66 844 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 C16orf46Q6P387 395 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 BTNL9Q6UXG8 535 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms