RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 GINM1Q9NU53 330 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 PCDHGB7Q9Y5F8 929 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 NPHP3-ACAD11A0A0J9YXS1 232 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 A0A1W2PQH9 124 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 NPHS1O60500 1241 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 PMLP29590 882 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 SARSP49591 514 aaKnown RBP6.5□□□□□ -1.37
ATXN3-233ENST00000555816 GJA9P57773 515 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 POMZP3Q6PJE2 187 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 LINC00482Q8N8I6 264 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 USP33Q8TEY7 942 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 PSMD1Q99460 953 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 SPATA25Q9BR10 227 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 FAM86C1Q9NVL1 165 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 CGGBP1Q9UFW8 167 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-233ENST00000555816 ZNF652Q9Y2D9 606 aa6.5□□□□□ -1.37
ATXN3-233ENST00000555816 COL5A3P25940 1745 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-233ENST00000555816 HEG1Q9ULI3 1381 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 TRAF5O00463 557 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 EPHX1P07099 455 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 HMOX1P09601 288 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 NAT2P11245 290 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 EPS15P42566 896 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 ZNF143P52747 638 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-233ENST00000555816 CASP7P55210 303 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 TEFQ10587 303 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 PAK2Q13177 524 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 WWC2Q6AWC2 1192 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 OLFM4Q6UX06 510 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 NT5DC4Q86YG4 428 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 MMP19Q99542 508 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 MCMBPQ9BTE3 642 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 LNPKQ9C0E8 428 aa6.49□□□□□ -1.37
ATXN3-233ENST00000555816 ANKRD34BA5PLL1 514 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 STXBP3O00186 592 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 PPP1R11O60927 126 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-233ENST00000555816 VAMP4O75379 141 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 CELF2O95319 508 aaKnown RBP6.48□□□□□ -1.37
ATXN3-233ENST00000555816 ERCC5P28715 1186 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-233ENST00000555816 KIAA2012Q0VF49 1180 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 HHIPL2Q6UWX4 724 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 ADCY4Q8NFM4 1077 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 SMARCC2Q8TAQ2 1214 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 GPR20Q99678 358 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 NGRNQ9NPE2 291 aaKnown RBP6.48□□□□□ -1.37
ATXN3-233ENST00000555816 ADARB2Q9NS39 739 aaKnown RBP6.48□□□□□ -1.37
ATXN3-233ENST00000555816 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-233ENST00000555816 EFR3BQ9Y2G0 817 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 RWDD3Q9Y3V2 267 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 KNSTRNQ9Y448 316 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 ADAMTS7Q9UKP4 1686 aa6.48□□□□□ -1.37
ATXN3-233ENST00000555816 NRXN2Q9P2S2 1712 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-233ENST00000555816 DIAPH1O60610 1272 aaKnown RBP6.47□□□□□ -1.37
ATXN3-233ENST00000555816 ITGB3P05106 788 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 CYP2C8P10632 490 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 MC3RP41968 323 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 MAGEA10P43363 369 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-233ENST00000555816 NOGQ13253 232 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 IQCEQ6IPM2 695 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 DCP2Q8IU60 420 aaKnown RBP6.47□□□□□ -1.37
ATXN3-233ENST00000555816 ADGRG2Q8IZP9 1017 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 COPS5Q92905 334 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 GPRASP2Q96D09 838 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 VPS33BQ9H267 617 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 SUGT1Q9Y2Z0 365 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 USP16Q9Y5T5 823 aa6.47□□□□□ -1.37
ATXN3-233ENST00000555816 A0A1B0GTL3 188 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 C7orf72A4D263 438 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 SNRPA1P09661 255 aaKnown RBP6.46□□□□□ -1.38
ATXN3-233ENST00000555816 TJP1Q07157 1748 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 DPY19L1Q2PZI1 675 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 CRY2Q49AN0 593 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 FERMT3Q86UX7 667 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 KLHL6Q8WZ60 621 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 SEC16BQ96JE7 1060 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 FGD4Q96M96 766 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 APBA2Q99767 749 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 AP5M1Q9H0R1 490 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 TMX4Q9H1E5 349 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-233ENST00000555816 SPATA6Q9NWH7 488 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-233ENST00000555816 GPRC5DQ9NZD1 345 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 GULP1Q9UBP9 304 aa6.46□□□□□ -1.38
ATXN3-233ENST00000555816 ANKRD26Q9UPS8 1709 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 KCNQ3O43525 872 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 GJA8P48165 433 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 SOX10P56693 466 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 CCDC81Q6ZN84 652 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 FAM124AQ86V42 546 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 ZNF761Q86XN6 746 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-233ENST00000555816 CPNE8Q86YQ8 564 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 TTC9BQ8N6N2 239 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 PLEKHO2Q8TD55 490 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 RPGRQ92834 1020 aaKnown RBP6.45□□□□□ -1.38
ATXN3-233ENST00000555816 ZBTB8AQ96BR9 441 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 RBM17Q96I25 401 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms