RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PSMC6P62333 389 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 NKX3-2P78367 333 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 PURAQ00577 322 aaKnown RBP12.41□□□□□ -0.42
SHMT2-220ENST00000555634 DPYDQ12882 1025 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 CUL4BQ13620 913 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 KCNB1Q14721 858 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 PLCB4Q15147 1175 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 KIAA0753Q2KHM9 967 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 FAM47CQ5HY64 1035 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 FAM102BQ5T8I3 360 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 RINT1Q6NUQ1 792 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 ANO5Q75V66 913 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 SH3RF1Q7Z6J0 888 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 GRAMD1CQ8IYS0 662 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 STAMQ92783 540 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 SCLT1Q96NL6 688 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 REEP2Q9BRK0 252 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 C16orf70Q9BSU1 422 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 TMEM106CQ9BVX2 250 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 UNC93B1Q9H1C4 597 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 BLZF1Q9H2G9 400 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 PAK6Q9NQU5 681 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-220ENST00000555634 PANK4Q9NVE7 773 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 WRAP73Q9P2S5 460 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-220ENST00000555634 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 MYMKA6NI61 221 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 M0QZ92 97 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 MYCP01106 439 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-220ENST00000555634 ASGR1P07306 291 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 IGBP1P78318 339 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 RAD51AP2Q09MP3 1159 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 PSMD2Q13200 908 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 ALCAMQ13740 583 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 TFDP1Q14186 410 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 LRRC41Q15345 812 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 GRIK4Q16099 956 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 KCNA10Q16322 511 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 TMEM63BQ5T3F8 832 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 L1TD1Q5T7N2 865 aaKnown RBP12.4□□□□□ -0.42
SHMT2-220ENST00000555634 RBM43Q6ZSC3 357 aaKnown RBP12.4□□□□□ -0.42
SHMT2-220ENST00000555634 RSPH3Q86UC2 560 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 METTL13Q8N6R0 699 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 PSPC1Q8WXF1 523 aaKnown RBP12.4□□□□□ -0.42
SHMT2-220ENST00000555634 ARMC5Q96C12 935 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 DEFB118Q96PH6 123 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 PCYT2Q99447 389 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 RUSC1Q9BVN2 902 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 TUBE1Q9UJT0 475 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 PCDHA5Q9Y5H7 936 aa12.4□□□□□ -0.42
SHMT2-220ENST00000555634 UBE4BO95155 1302 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 C17orf102A2RUQ5 167 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 PSMA7O14818 248 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 HIP1RO75146 1068 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 SMIM10L2AP0DMW4 78 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 SMIM10L2BP0DMW5 78 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 ACLYP53396 1101 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 NPEPPSP55786 919 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 TPM4P67936 248 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 COASYQ13057 564 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 MXD4Q14582 209 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-220ENST00000555634 HERC4Q5GLZ8 1057 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-220ENST00000555634 FAM26FQ5R3K3 315 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 CXCL17Q6UXB2 119 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 FAM178BQ8IXR5 827 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 MYCT1Q8N699 235 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 ZNF333Q96JL9 665 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 TSPY26PQ9H489 355 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 MRPL44Q9H9J2 332 aaKnown RBP12.39□□□□□ -0.43
SHMT2-220ENST00000555634 STARD7Q9NQZ5 370 aa12.39□□□□□ -0.43
SHMT2-220ENST00000555634 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-220ENST00000555634 MROH7Q68CQ1 1323 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-220ENST00000555634 TMEM150BA6NC51 233 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 MYADML2A6NDP7 307 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 K7ENM7 598 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 BIN1O00499 593 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 MAFO75444 373 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-220ENST00000555634 RHOBTB3O94955 611 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 TFRCP02786 760 aaKnown RBP12.38□□□□□ -0.43
SHMT2-220ENST00000555634 PLS3P13797 630 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 INSRRP14616 1297 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 RTP1P59025 263 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 NLRP12P59046 1061 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 CDC42EP1Q00587 391 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 PTPN11Q06124 597 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-220ENST00000555634 TYRO3Q06418 890 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-220ENST00000555634 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 NT5DC1Q5TFE4 455 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 ZNF658Q5TYW1 1059 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-220ENST00000555634 IER5Q5VY09 327 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 TAF2Q6P1X5 1199 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 NFRKBQ6P4R8 1299 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 C1orf186Q6ZWK4 172 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 MAEAQ7L5Y9 396 aa12.38□□□□□ -0.43
SHMT2-220ENST00000555634 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms