RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 IRF6O14896 467 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 PJA2O43164 708 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 CHMP2AO43633 222 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 MYBP10242 640 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 RARAP10276 462 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 PLCB4Q15147 1175 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 TMEM266Q2M3C6 531 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 CCDC152Q4G0S7 254 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 CD302Q8IX05 232 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 RNF10Q8N5U6 811 aaKnown RBP9.62□□□□□ -0.87
SYNE2-217ENST00000555022 ALG3Q92685 438 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 SH2D3AQ9BRG2 576 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 CTTNBP2NLQ9P2B4 639 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 ZBTB12Q9Y330 459 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-217ENST00000555022 PCDHGC5Q9Y5F6 944 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 AKAP11Q9UKA4 1901 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 MYH7BA7E2Y1 1941 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 DPPA5A6NC42 116 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 A6NNZ2 444 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L15C9J2P7 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L13C9JLJ4 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L11C9JVI0 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L18D6R9N7 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L22D6RA61 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L17D6RBQ6 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L19D6RCP7 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L20D6RJB6 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 RASGRF2O14827 1237 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 UCHL3P15374 230 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 CNGA1P29973 690 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 RPL21P46778 160 aaKnown RBP9.62□□□□□ -0.87
SYNE2-217ENST00000555022 INHBEP58166 350 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 LACTBP83111 547 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L24Q0WX57 530 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 TUBB8Q3ZCM7 444 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 DCAF12L1Q5VU92 463 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 USP17L6PQ6QN14 398 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 JAMLQ86YT9 394 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 MREGQ8N565 214 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 SUPT20HQ8NEM7 779 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 ATP8B4Q8TF62 1192 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 C6orf50Q9HD87 102 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 SWAP70Q9UH65 585 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 BCL9LQ86UU0 1499 aa9.62□□□□□ -0.87
SYNE2-217ENST00000555022 GSTTP1A0A1W2PQM5 241 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 TOM1O60784 492 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 DLATP10515 647 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 SSR1P43307 286 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 PSMC6P62333 389 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ITIH3Q06033 890 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 TTBK2Q6IQ55 1244 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 HOOK3Q86VS8 718 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 FITM2Q8N6M3 262 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 SLC35G2Q8TBE7 412 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ATXN2LQ8WWM7 1075 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 RAD54LQ92698 747 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ARHGEF2Q92974 986 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 DDX50Q9BQ39 737 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 C12orf65Q9H3J6 166 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 BARHL2Q9NY43 387 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ADAM22Q9P0K1 906 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ATRNO75882 1429 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 TNS3Q68CZ2 1445 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 MYH7P12883 1935 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 DDX3XO00571 662 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ENTPD5O75356 428 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 CBX6O95503 412 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 TNFRSF8P28908 595 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 RFC4P35249 363 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 MSH2P43246 934 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 CDK17Q00537 523 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 MTMR3Q13615 1198 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 CTTNQ14247 550 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ZFYVE27Q5T4F4 411 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 RNF220Q5VTB9 566 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ZNF572Q7Z3I7 529 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 SCFD2Q8WU76 684 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 THAP2Q9H0W7 228 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ADAM7Q9H2U9 754 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 EMILIN3Q9NT22 766 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 PKD2L1Q9P0L9 805 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ARMCX3Q9UH62 379 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ASIC3Q9UHC3 531 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 SSU72P8A0A1W2PR75 194 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 DNAJC8O75937 253 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 HNRNPH3P31942 346 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 STX2P32856 288 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 RFC5P40937 340 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 RBM5P52756 815 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ATP11AP98196 1134 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 DRP2Q13474 957 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 COG2Q14746 738 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 LRIG3Q6UXM1 1119 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 SFR1Q86XK3 245 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 GUF1Q8N442 669 aaKnown RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 SLC20A1Q8WUM9 679 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 UCMAQ8WVF2 138 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ERP27Q96DN0 273 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms