RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 TRIM50Q86XT4 487 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 KAT2BQ92831 832 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 PCYT2Q99447 389 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.23■□□□□ 0.67
SHOX-204ENST00000554971 EML1O00423 815 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 NOP56O00567 594 aaKnown RBP19.23■□□□□ 0.67
SHOX-204ENST00000554971 CHMP2AO43633 222 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 PPFIA4O75335 1185 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 TPM1P09493 284 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 OR52Z1P0C646 297 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 COL6A1P12109 1028 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 CD44P16070 742 aaKnown RBP19.23■□□□□ 0.67
SHOX-204ENST00000554971 TCF7P36402 384 aaPredicted RBP19.23■□□□□ 0.67
SHOX-204ENST00000554971 TXKP42681 527 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 ACLYP53396 1101 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 PPP2R5CQ13362 524 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 TRIM14Q14142 442 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 ABHD15Q6UXT9 468 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 SMAP1Q8IYB5 467 aaPredicted RBP19.23■□□□□ 0.67
SHOX-204ENST00000554971 SLFN12Q8IYM2 578 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 C16orf70Q9BSU1 422 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 TEKT3Q9BXF9 490 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 DGKDQ16760 1214 aa19.22■□□□□ 0.67
SHOX-204ENST00000554971 ZNF746Q6NUN9 644 aaPredicted RBP19.22■□□□□ 0.67
SHOX-204ENST00000554971 ANKLE1Q8NAG6 615 aa19.22■□□□□ 0.67
SHOX-204ENST00000554971 TSEN34Q9BSV6 310 aaKnown RBP19.22■□□□□ 0.67
SHOX-204ENST00000554971 DISC1Q9NRI5 854 aa19.22■□□□□ 0.67
SHOX-204ENST00000554971 OGFRQ9NZT2 677 aa19.22■□□□□ 0.67
SHOX-204ENST00000554971 PHF24Q9UPV7 400 aa19.22■□□□□ 0.67
SHOX-204ENST00000554971 A0A1W2PQ45 241 aaPredicted RBP19.21■□□□□ 0.67
SHOX-204ENST00000554971 A0A1W2PQY0 241 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 LGALS2P05162 132 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 STAT6P42226 847 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 KRT76Q01546 638 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 PAK1Q13153 545 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 RRAGBQ5VZM2 374 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 CNGA4Q8IV77 575 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 CCDC60Q8IWA6 550 aaPredicted RBP19.21■□□□□ 0.67
SHOX-204ENST00000554971 PCSK9Q8NBP7 692 aaKnown RBP19.21■□□□□ 0.67
SHOX-204ENST00000554971 SEPT1Q8WYJ6 367 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 PAWRQ96IZ0 340 aaKnown RBP19.21■□□□□ 0.67
SHOX-204ENST00000554971 PCDHA12Q9UN75 941 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 IGKV6D-21A0A0A0MT36 114 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 MOXD2PA6NHM9 499 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 POTEMA6NI47 508 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 KBTBD13C9JR72 458 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 RPN1P04843 607 aaKnown RBP19.21■□□□□ 0.67
SHOX-204ENST00000554971 FECHP22830 423 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 PPP1R2P41236 205 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 PPP1R13LQ8WUF5 828 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 DNAI1Q9UI46 699 aa19.21■□□□□ 0.67
SHOX-204ENST00000554971 GRIN2DO15399 1336 aa19.2■□□□□ 0.66
SHOX-204ENST00000554971 F2P00734 622 aa19.2■□□□□ 0.66
SHOX-204ENST00000554971 MYL3P08590 195 aa19.2■□□□□ 0.66
SHOX-204ENST00000554971 KLHL10Q6JEL2 608 aa19.2■□□□□ 0.66
SHOX-204ENST00000554971 IGSF22Q8N9C0 903 aa19.2■□□□□ 0.66
SHOX-204ENST00000554971 WDR64B1ANS9 1081 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 LGR5O75473 907 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 UBA7P41226 1012 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 TECP42680 631 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 BRDTQ58F21 947 aaPredicted RBP19.19■□□□□ 0.66
SHOX-204ENST00000554971 NOC3LQ8WTT2 800 aaKnown RBP19.19■□□□□ 0.66
SHOX-204ENST00000554971 MTRQ99707 1265 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 PCDHA10Q9Y5I2 948 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 EMSYQ7Z589 1322 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 MARCH6O60337 910 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 CCDC175P0C221 793 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 SUPT20HL2P0C7V6 817 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 ADKP55263 362 aaKnown RBP19.19■□□□□ 0.66
SHOX-204ENST00000554971 PSMC6P62333 389 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 STIM1Q13586 685 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 TUBB2AQ13885 445 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 UGCGQ16739 394 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 UTP14CQ5TAP6 766 aaKnown RBP19.19■□□□□ 0.66
SHOX-204ENST00000554971 TUBB2BQ9BVA1 445 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 SENP6Q9GZR1 1112 aaPredicted RBP19.19■□□□□ 0.66
SHOX-204ENST00000554971 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
SHOX-204ENST00000554971 FXR2P51116 673 aaKnown RBP eCLIP19.18■□□□□ 0.66
SHOX-204ENST00000554971 HSP90AA4PQ58FG1 418 aa19.18■□□□□ 0.66
SHOX-204ENST00000554971 CCDC47Q96A33 483 aaKnown RBP19.18■□□□□ 0.66
SHOX-204ENST00000554971 CTNND2Q9UQB3 1225 aa19.18■□□□□ 0.66
SHOX-204ENST00000554971 SAMM50Q9Y512 469 aa19.18■□□□□ 0.66
SHOX-204ENST00000554971 H3BRB1 525 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 HAS3O00219 553 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 ZEB2O60315 1214 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 CAPN2P17655 700 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 ATP4AP20648 1035 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 STX17P56962 302 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 NCAPH2Q6IBW4 605 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 SWSAP1Q6NVH7 229 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 MIER3Q7Z3K6 550 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 MTG1Q9BT17 334 aaPredicted RBP19.17■□□□□ 0.66
SHOX-204ENST00000554971 TUT1Q9H6E5 874 aaKnown RBP19.17■□□□□ 0.66
SHOX-204ENST00000554971 WRAP73Q9P2S5 460 aaPredicted RBP19.17■□□□□ 0.66
SHOX-204ENST00000554971 IGSF9BQ9UPX0 1349 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 TEX33O43247 280 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 ZNF862O60290 1169 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 RHOBTB3O94955 611 aa19.17■□□□□ 0.66
SHOX-204ENST00000554971 CASQ1P31415 396 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms