RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-208ENST00000554929 CSPG5O95196 566 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 UQCRHP07919 91 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 SELPP16109 830 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 MARCKSP29966 332 aaPredicted RBP11.65□□□□□ -0.54
SRSF5-208ENST00000554929 GTF2F1P35269 517 aaKnown RBP eCLIP11.65□□□□□ -0.544e-70■■■■□ 21.7
SRSF5-208ENST00000554929 PTGISQ16647 500 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 CT47A1Q5JQC4 288 aaPredicted RBP11.65□□□□□ -0.54
SRSF5-208ENST00000554929 PPP1R18Q6NYC8 613 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 NFRKBQ6P4R8 1299 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 CTR9Q6PD62 1173 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 SHC4Q6S5L8 630 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.65□□□□□ -0.54
SRSF5-208ENST00000554929 LRRC8DQ7L1W4 858 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 TMEM192Q8IY95 271 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 MYOCDQ8IZQ8 938 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 FAM133AQ8N9E0 248 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 PRPF38AQ8NAV1 312 aaKnown RBP11.65□□□□□ -0.54
SRSF5-208ENST00000554929 MYRIPQ8NFW9 859 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 RIPOR3Q96MK2 946 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 ZKSCAN3Q9BRR0 538 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 GJB4Q9NTQ9 266 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 SWAP70Q9UH65 585 aa11.65□□□□□ -0.54
SRSF5-208ENST00000554929 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.65□□□□□ -0.54
SRSF5-208ENST00000554929 NAV1Q8NEY1 1877 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 BTBD18B2RXH4 712 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 USP17L21D6R901 530 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 ATP2A1O14983 1001 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 KIF5BP33176 963 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 KRT2P35908 639 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 NDUFV1P49821 464 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 CPT1AP50416 773 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 PUM1Q14671 1186 aaKnown RBP eCLIP11.64□□□□□ -0.55
SRSF5-208ENST00000554929 ST3GAL2Q16842 350 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.64□□□□□ -0.55
SRSF5-208ENST00000554929 KIAA2013Q8IYS2 634 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 FAM177A1Q8N128 213 aaPredicted RBP11.64□□□□□ -0.55
SRSF5-208ENST00000554929 ENAHQ8N8S7 591 aaPredicted RBP11.64□□□□□ -0.55
SRSF5-208ENST00000554929 TRIML1Q8N9V2 468 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 CNNM3Q8NE01 707 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 CTCFLQ8NI51 663 aaPredicted RBP11.64□□□□□ -0.55
SRSF5-208ENST00000554929 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 RPGRIP1Q96KN7 1286 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 PYM1Q9BRP8 204 aaKnown RBP11.64□□□□□ -0.55
SRSF5-208ENST00000554929 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
SRSF5-208ENST00000554929 SRPRBQ9Y5M8 271 aaKnown RBP11.64□□□□□ -0.55
SRSF5-208ENST00000554929 CXCL10P02778 98 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 AMHP03971 560 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 GNAQP50148 359 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 COPS2P61201 443 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 HTRA4P83105 476 aaPredicted RBP11.63□□□□□ -0.55
SRSF5-208ENST00000554929 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
SRSF5-208ENST00000554929 CBX2Q14781 532 aaPredicted RBP11.63□□□□□ -0.55
SRSF5-208ENST00000554929 DUSP28Q4G0W2 176 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 ZBTB33Q86T24 672 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 METTL3Q86U44 580 aaKnown RBP11.63□□□□□ -0.55
SRSF5-208ENST00000554929 FBXO11Q86XK2 927 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 LRRC8AQ8IWT6 810 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 CCDC150Q8NCX0 1101 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 OR6J1Q8NGC5 347 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 CCDC17Q96LX7 622 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 YME1L1Q96TA2 773 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 KANSL2Q9H9L4 492 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 ZNF287Q9HBT7 754 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 DCP1AQ9NPI6 582 aaPredicted RBP11.63□□□□□ -0.55
SRSF5-208ENST00000554929 KCND1Q9NSA2 647 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 PYCARDQ9ULZ3 195 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 BAHCC1Q9P281 2608 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 SCN10AQ9Y5Y9 1956 aa11.63□□□□□ -0.55
SRSF5-208ENST00000554929 KMT2BQ9UMN6 2715 aaPredicted RBP11.62□□□□□ -0.55
SRSF5-208ENST00000554929 KIF2AO00139 706 aaPredicted RBP11.62□□□□□ -0.55
SRSF5-208ENST00000554929 PARNO95453 639 aaKnown RBP11.62□□□□□ -0.55
SRSF5-208ENST00000554929 TRAPPC10P48553 1259 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 FUT2Q10981 343 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 TROAPQ12815 778 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 DPCR1Q3MIW9 517 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 BRDTQ58F21 947 aaPredicted RBP11.62□□□□□ -0.55
SRSF5-208ENST00000554929 SMYD5Q6GMV2 418 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 TMTC3Q6ZXV5 915 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 TMEM105Q8N8V8 129 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 COL26A1Q96A83 441 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 PHF20Q9BVI0 1012 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 WDR11Q9BZH6 1224 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 ACAD9Q9H845 621 aa11.62□□□□□ -0.55
SRSF5-208ENST00000554929 A1CFQ9NQ94 594 aaKnown RBP11.62□□□□□ -0.55
SRSF5-208ENST00000554929 FBXO2Q9UK22 296 aaPredicted RBP11.62□□□□□ -0.55
SRSF5-208ENST00000554929 RALYQ9UKM9 306 aaKnown RBP11.62□□□□□ -0.55
SRSF5-208ENST00000554929 NLRC5Q86WI3 1866 aa11.61□□□□□ -0.55
SRSF5-208ENST00000554929 TPRP12270 2363 aaKnown RBP11.61□□□□□ -0.55
SRSF5-208ENST00000554929 ATG2AQ2TAZ0 1938 aa11.61□□□□□ -0.55
SRSF5-208ENST00000554929 MICAL3Q7RTP6 2002 aa11.61□□□□□ -0.55
SRSF5-208ENST00000554929 UPP2O95045 317 aa11.61□□□□□ -0.55
SRSF5-208ENST00000554929 SMC2O95347 1197 aa11.61□□□□□ -0.55
SRSF5-208ENST00000554929 EYA4O95677 639 aa11.61□□□□□ -0.55
SRSF5-208ENST00000554929 OATP04181 439 aa11.61□□□□□ -0.55
SRSF5-208ENST00000554929 TUBB4AP04350 444 aa11.61□□□□□ -0.55
SRSF5-208ENST00000554929 CKBP12277 381 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms