RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 WDR5P61964 334 aaKnown RBP13.83□□□□□ -0.2
SYNE2-214ENST00000554928 TBC1D8BQ0IIM8 1120 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 KIZQ2M2Z5 673 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 POTEGQ6S5H5 508 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 Q7L0L9 218 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 BRAPQ7Z569 592 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 RSPH3Q86UC2 560 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 OSMRQ99650 979 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 MMTAG2Q9BU76 263 aaKnown RBP13.83□□□□□ -0.2
SYNE2-214ENST00000554928 CELF4Q9BZC1 486 aaKnown RBP13.83□□□□□ -0.2
SYNE2-214ENST00000554928 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 YBX2Q9Y2T7 364 aaKnown RBP13.83□□□□□ -0.2
SYNE2-214ENST00000554928 MYH9P35579 1960 aaKnown RBP13.83□□□□□ -0.2
SYNE2-214ENST00000554928 KAT6AQ92794 2004 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-214ENST00000554928 MAGEB2O15479 319 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 MAFO75444 373 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-214ENST00000554928 ARHGEF15O94989 841 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 LYPLA2O95372 231 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 PARNO95453 639 aaKnown RBP13.82□□□□□ -0.2
SYNE2-214ENST00000554928 SF3A1Q15459 793 aaKnown RBP13.82□□□□□ -0.2
SYNE2-214ENST00000554928 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 KSR1Q8IVT5 923 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 IGSF22Q8N9C0 903 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 PBX4Q9BYU1 374 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 ADAMTS10Q9H324 1103 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 XPNPEP1Q9NQW7 623 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 LRWD1Q9UFC0 647 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 AKT3Q9Y243 479 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 NOC2LQ9Y3T9 749 aaKnown RBP13.82□□□□□ -0.2
SYNE2-214ENST00000554928 SLC4A7Q9Y6M7 1214 aa13.82□□□□□ -0.2
SYNE2-214ENST00000554928 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
SYNE2-214ENST00000554928 ACTN1P12814 892 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 PRPHP41219 470 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 NLRP11P59045 1033 aaKnown RBP13.81□□□□□ -0.2
SYNE2-214ENST00000554928 PTPAQ15257 358 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 IER5Q5VY09 327 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 RTN4RL1Q86UN2 441 aaPredicted RBP13.81□□□□□ -0.2
SYNE2-214ENST00000554928 NME8Q8N427 588 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 NEK9Q8TD19 979 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 SEPT8Q92599 483 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 POLR3CQ9BUI4 534 aaPredicted RBP13.81□□□□□ -0.2
SYNE2-214ENST00000554928 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
SYNE2-214ENST00000554928 TMX1Q9H3N1 280 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
SYNE2-214ENST00000554928 KDM3AQ9Y4C1 1321 aa13.81□□□□□ -0.2
SYNE2-214ENST00000554928 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 VWA3AA6NCI4 1184 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 MGEA5O60502 916 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 BAIAP3O94812 1187 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 HSP90AA1P07900 732 aaKnown RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 ATP2A2P16615 1042 aaKnown RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 FGFR4P22455 802 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 RPA1P27694 616 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 CCT6AP40227 531 aaKnown RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 RARRES1P49788 294 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 GPC3P51654 580 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 SMAD3P84022 425 aaKnown RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 EMC2Q15006 297 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 FAM117BQ6P1L5 589 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 DTHD1Q6ZMT9 781 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 TSHZ1Q6ZSZ6 1077 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 KCNK18Q7Z418 384 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 SPRED2Q7Z698 418 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 FAM228AQ86W67 206 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 LRRC15Q8TF66 581 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 CHAMP1Q96JM3 812 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 FAM161BQ96MY7 647 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 PNMA5Q96PV4 448 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 USP28Q96RU2 1077 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 NKX2-4Q9H2Z4 354 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 TTYH1Q9H313 450 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 TUFT1Q9NNX1 390 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 SUCLA2Q9P2R7 463 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-214ENST00000554928 PADI3Q9ULW8 664 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 PTPRSQ13332 1948 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 EVPLQ92817 2033 aa13.8□□□□□ -0.2
SYNE2-214ENST00000554928 ABHD14A-ACY1A0A1B0GW23 586 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 LCHNA4D1U4 455 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 M0QZ92 97 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 LAD1O00515 517 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 DKC1O60832 514 aaKnown RBP eCLIP13.79□□□□□ -0.2
SYNE2-214ENST00000554928 DNAJB2P25686 324 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 CRYBB1P53674 252 aaPredicted RBP13.79□□□□□ -0.2
SYNE2-214ENST00000554928 POLGP54098 1239 aaPredicted RBP13.79□□□□□ -0.2
SYNE2-214ENST00000554928 IKBKEQ14164 716 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 PDIA5Q14554 519 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
SYNE2-214ENST00000554928 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
SYNE2-214ENST00000554928 HERC6Q8IVU3 1022 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 PLIN2Q99541 437 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 MTIF3Q9H2K0 278 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms