RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TMOD1P28289 359 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 PTK7Q13308 1070 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 PTGISQ16647 500 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 KANK3Q6NY19 840 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 SERINC5Q86VE9 423 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 ZNF710Q8N1W2 664 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 ATP6V0A4Q9HBG4 840 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 NOD1Q9Y239 953 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 KAT6AQ92794 2004 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 A0A087WWV3 80 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 DCDC2CA8MYV0 355 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 TREHO43280 583 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 ACTN4O43707 911 aaKnown RBP18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 CD4P01730 458 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 GUCY2CP25092 1073 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 DNM2P50570 870 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 ATN1P54259 1190 aaPredicted RBP18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 SOX10P56693 466 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 SNW1Q13573 536 aaKnown RBP18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 HIC1Q14526 733 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 MCM6Q14566 821 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 EMC2Q15006 297 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 RINT1Q6NUQ1 792 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 C1orf186Q6ZWK4 172 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 RPAINQ86UA6 219 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 TRAPPC12Q8WVT3 735 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 TCP11Q8WWU5 503 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 MTRQ99707 1265 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 SH2D3AQ9BRG2 576 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 BMP2KQ9NSY1 1161 aaPredicted RBP18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 B4GALT4O60513 344 aa18.27■□□□□ 0.51
SPTLC2-203ENST00000554901 SSBP05455 408 aaKnown RBP eCLIP18.27■□□□□ 0.51
SPTLC2-203ENST00000554901 MYL1P05976 194 aa18.27■□□□□ 0.51
SPTLC2-203ENST00000554901 LONRF3Q496Y0 759 aa18.27■□□□□ 0.51
SPTLC2-203ENST00000554901 KRBA2Q6ZNG9 492 aa18.27■□□□□ 0.51
SPTLC2-203ENST00000554901 ELOA2Q8IYF1 753 aaPredicted RBP18.27■□□□□ 0.51
SPTLC2-203ENST00000554901 NME8Q8N427 588 aa18.27■□□□□ 0.51
SPTLC2-203ENST00000554901 LINC01465Q8N7H1 131 aa18.27■□□□□ 0.51
SPTLC2-203ENST00000554901 USO1O60763 962 aaKnown RBP18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 CAND2O75155 1236 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 CYP2C9P11712 490 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 LIG1P18858 919 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 RTP1P59025 263 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 CDC42EP1Q00587 391 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 TLE2Q04725 743 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 LRRC26Q2I0M4 334 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 TRIM60Q495X7 471 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 TPRNQ4KMQ1 711 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 IER5Q5VY09 327 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 EFCAB12Q6NXP0 572 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 CNNM4Q6P4Q7 775 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 RSPH3Q86UC2 560 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 GPBP1Q86WP2 473 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 CNNM3Q8NE01 707 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 KIFAP3Q92845 792 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 CTAGE1Q96RT6 745 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 HTATIP2Q9BUP3 242 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 TRMT13Q9NUP7 481 aaKnown RBP18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 SERTAD1Q9UHV2 236 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 ODF2LQ9ULJ1 636 aa18.26■□□□□ 0.51
SPTLC2-203ENST00000554901 ARID2Q68CP9 1835 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 KINO60870 393 aaKnown RBP18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 NR1I2O75469 434 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 MBD3O95983 291 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 ZNF200P98182 395 aaPredicted RBP18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 RBL2Q08999 1139 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 METTL13Q8N6R0 699 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 PPP1R13LQ8WUF5 828 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 DRC1Q96MC2 740 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 RUSC1Q9BVN2 902 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 TRPV6Q9H1D0 765 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 C17orf75Q9HAS0 396 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 XPNPEP1Q9NQW7 623 aa18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 HOOK1Q9UJC3 728 aaKnown RBP18.25■□□□□ 0.51
SPTLC2-203ENST00000554901 ASAP2O43150 1006 aa18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 PQBP1O60828 265 aaKnown RBP18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 DHX8Q14562 1220 aaKnown RBP18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 MXD4Q14582 209 aaPredicted RBP18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 ARSHQ5FYA8 562 aa18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 SH3RF1Q7Z6J0 888 aa18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 KIAA0319LQ8IZA0 1049 aa18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 CAGE1Q8TC20 777 aa18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 PSPC1Q8WXF1 523 aaKnown RBP18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 SUGCTQ9HAC7 445 aa18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 DACT1Q9NYF0 836 aa18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 KCNG1Q9UIX4 513 aa18.24■□□□□ 0.51
SPTLC2-203ENST00000554901 ARL2P36404 184 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 DDX12PQ92771 950 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 PAGE5Q96GU1 130 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 C7orf25Q9BPX7 421 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 TRIM9Q9C026 710 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 ATP11BQ9Y2G3 1177 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 MYMKA6NI61 221 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 PITPNM1O00562 1244 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 KRT18P05783 430 aaKnown RBP18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 CLCN3P51790 818 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 FAAP100Q0VG06 881 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms