RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 FLT3P36888 993 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 MAGOHP61326 146 aaKnown RBP10.34□□□□□ -0.75
SYNE2-213ENST00000554805 UBXN2AP68543 259 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 ZC2HC1CQ53FD0 456 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-213ENST00000554805 MAEAQ7L5Y9 396 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 KIAA0825Q8IV33 1275 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 ZFPM1Q8IX07 1006 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 SYT2Q8N9I0 419 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-213ENST00000554805 ACTRT1Q8TDG2 376 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 MAGOHBQ96A72 148 aaKnown RBP10.34□□□□□ -0.75
SYNE2-213ENST00000554805 SELENOSQ9BQE4 189 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 NEUROG2Q9H2A3 272 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 KCNMB3Q9NPA1 279 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 OSGEPQ9NPF4 335 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 DNAJC12Q9UKB3 198 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 AJAP1Q9UKB5 411 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-213ENST00000554805 ATF5Q9Y2D1 282 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-213ENST00000554805 EVI5O60447 810 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 LRRN2O75325 713 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 CPP00450 1065 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 TRIM49P0CI25 452 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 TRIM49CP0CI26 452 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 ICA1Q05084 483 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 DRAP1Q14919 205 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-213ENST00000554805 EPHA7Q15375 998 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 MCTP2Q6DN12 878 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 CD302Q8IX05 232 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 SPICE1Q8N0Z3 855 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 CYP2W1Q8TAV3 490 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 SCFD2Q8WU76 684 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 CCDC17Q96LX7 622 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 TRAF3IP3Q9Y228 551 aa10.34□□□□□ -0.75
SYNE2-213ENST00000554805 IGKV6D-41A0A0C4DH26 115 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 RPA1P27694 616 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 ITGB3BPQ13352 177 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-213ENST00000554805 LRIG3Q6UXM1 1119 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 FRMD4BQ9Y2L6 1034 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 GMNCA6NCL1 334 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 PPEF1O14829 653 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-213ENST00000554805 BUB1BO60566 1050 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-213ENST00000554805 CFBP00751 764 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 RDXP35241 583 aaKnown RBP10.33□□□□□ -0.76
SYNE2-213ENST00000554805 PSMC2P35998 433 aaKnown RBP10.33□□□□□ -0.76
SYNE2-213ENST00000554805 ZNF844Q08AG5 666 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 AP3B2Q13367 1082 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 CERS5Q8N5B7 392 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 SLC35C1Q96A29 364 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 EIF2AK1Q9BQI3 630 aaKnown RBP10.33□□□□□ -0.76
SYNE2-213ENST00000554805 COA1Q9GZY4 146 aa10.33□□□□□ -0.76
SYNE2-213ENST00000554805 EXOC3O60645 756 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 FAM107AO95990 144 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 LMNB1P20700 586 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 NOVP48745 357 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 PLTPP55058 493 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 LRRC57Q8N9N7 239 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 SLC35G2Q8TBE7 412 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 CYFIP2Q96F07 1278 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 CALR3Q96L12 384 aaKnown RBP10.32□□□□□ -0.76
SYNE2-213ENST00000554805 FAM114A2Q9NRY5 505 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 CTTNBP2NLQ9P2B4 639 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 SNX24Q9Y343 169 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 FAM86B1E9PN63 330 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 FAM86B2P0C5J1 330 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 SPATA31C1P0DKV0 1188 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 PPP2R2AP63151 447 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-213ENST00000554805 UAP1Q16222 522 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-213ENST00000554805 FMO2Q99518 471 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 SLITRK6Q9H5Y7 841 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 PKD2L1Q9P0L9 805 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 SUCLA2Q9P2R7 463 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-213ENST00000554805 DAAM1Q9Y4D1 1078 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 F5H6K3 240 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 MEIS2O14770 477 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 MSH4O15457 936 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 CCDC172P0C7W6 258 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 GUCY2CP25092 1073 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 RXRBP28702 533 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 SOX5P35711 763 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 KLRC3Q07444 240 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 BIRC3Q13489 604 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 LLGL1Q15334 1064 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 NT5DC3Q86UY8 548 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 RAB17Q9H0T7 212 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 TMOD4Q9NZQ9 345 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 LAMB2P55268 1798 aa10.32□□□□□ -0.76
SYNE2-213ENST00000554805 EML1O00423 815 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 ZBTB39O15060 712 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 HOXD13P35453 343 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 DR1Q01658 176 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 COG2Q14746 738 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 FAM178BQ8IXR5 827 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 CACNA2D3Q8IZS8 1091 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 MDM1Q8TC05 714 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 DCAF4Q8WV16 495 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.31□□□□□ -0.76
SYNE2-213ENST00000554805 GLG1Q92896 1179 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 DYDC2Q96IM9 177 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 FAM20AQ96MK3 541 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 DBNDD1Q9H9R9 158 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms