RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 PRR16Q569H4 304 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 MCTP2Q6DN12 878 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 BLOC1S2Q6QNY1 142 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 FAM43BQ6ZT52 329 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 PPP1R16BQ96T49 567 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 HCSTQ9UBK5 93 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 PCDHB7Q9Y5E2 793 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 PCDHGC5Q9Y5F6 944 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 PCDHA10Q9Y5I2 948 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 GPR182O15218 404 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 EYA4O95677 639 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 ALADP13716 330 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 IFNAR1P17181 557 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 GNA11P29992 359 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 PDIA3P30101 505 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 FGD1P98174 961 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 TRMT1LQ7Z2T5 733 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 SMAP1Q8IYB5 467 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 OSMRQ99650 979 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 RNF26Q9BY78 433 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 ADAMTS10Q9H324 1103 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 CWH43Q9H720 699 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 GABBR1Q9UBS5 961 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 LRFN2Q9ULH4 789 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 FAM50BQ9Y247 325 aa13.85□□□□□ -0.19
MTHFD1-207ENST00000554677 TBKBP1A7MCY6 615 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 MSH4O15457 936 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 DCXO43602 365 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 GLP2RO95838 553 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 PSAPP07602 524 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 IBSPP21815 317 aaPredicted RBP13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 CLCN3P51790 818 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 SMAD4Q13485 552 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 NBR1Q14596 966 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 CKAP2LQ8IYA6 745 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 METTL13Q8N6R0 699 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 EFHBQ8N7U6 833 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 CCDC12Q8WUD4 166 aaPredicted RBP13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 C1orf112Q9NSG2 853 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 TYW1Q9NV66 732 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 VPS54Q9P1Q0 977 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 CD207Q9UJ71 328 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 HCN4Q9Y3Q4 1203 aa13.84□□□□□ -0.19
MTHFD1-207ENST00000554677 DENND3A2RUS2 1198 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 MAGEB2O15479 319 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 FGFR1P11362 822 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 NRIP1P48552 1158 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 USP11P51784 963 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 ERVFC1P60507 584 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 CCT2P78371 535 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 TOB2Q14106 344 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 UGCGQ16739 394 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 ODR4Q5SWX8 454 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 EFCAB12Q6NXP0 572 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 LRRC55Q6ZSA7 311 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 RBM23Q86U06 439 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 SLC5A5Q92911 643 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 GJA10Q969M2 543 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 SLC26A6Q9BXS9 759 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 ELAC1Q9H777 363 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 DISC1Q9NRI5 854 aa13.83□□□□□ -0.2
MTHFD1-207ENST00000554677 ZDBF2Q9HCK1 2354 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 M0R2N6 131 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 FSCN2O14926 492 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 STBD1O95210 358 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 NLRP11P59045 1033 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 RBM10P98175 930 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 UBE3AQ05086 875 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 COASYQ13057 564 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 TARBP2Q15633 366 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 NPY5RQ15761 445 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 B3GNT9Q6UX72 402 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 LRRC71Q8N4P6 559 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 COLGALT1Q8NBJ5 622 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 SMRP1Q8NCR6 262 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 VN1R2Q8NFZ6 395 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 BICD2Q8TD16 824 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 CEP89Q96ST8 783 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 UNC45AQ9H3U1 944 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 SH3GLB2Q9NR46 395 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 PCDHB12Q9Y5F1 795 aa13.82□□□□□ -0.2
MTHFD1-207ENST00000554677 WDR64B1ANS9 1081 aa13.81□□□□□ -0.2
MTHFD1-207ENST00000554677 PER2O15055 1255 aa13.81□□□□□ -0.2
MTHFD1-207ENST00000554677 PSMD10O75832 226 aa13.81□□□□□ -0.2
MTHFD1-207ENST00000554677 FGF18O76093 207 aa13.81□□□□□ -0.2
MTHFD1-207ENST00000554677 OATP04181 439 aa13.81□□□□□ -0.2
MTHFD1-207ENST00000554677 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-207ENST00000554677 PSMA5P28066 241 aa13.81□□□□□ -0.2
MTHFD1-207ENST00000554677 NDUFV1P49821 464 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms