RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 PLIN2Q99541 437 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 FEZ1Q99689 392 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 MOV10L1Q9BXT6 1211 aaKnown RBP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 SAP130Q9H0E3 1048 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 IKZF4Q9H2S9 585 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 C6orf50Q9HD87 102 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 A1CFQ9NQ94 594 aaKnown RBP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 HOMER2Q9NSB8 354 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 INTS13Q9NVM9 706 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 VTI1BQ9UEU0 232 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 MAN1B1Q9UKM7 699 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 CFAP45Q9UL16 551 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 KCNH3Q9ULD8 1083 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 PCDHB11Q9Y5F2 797 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 PCDHA5Q9Y5H7 936 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 UBIAD1Q9Y5Z9 338 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 HTTP42858 3142 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 TMEM150BA6NC51 233 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 TMEM229AB2RXF0 380 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 MEIS1O00470 390 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 BIN1O00499 593 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 POLR2DO15514 142 aaKnown RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 OIP5O43482 229 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 CCNT1O60563 726 aaKnown RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 CFBP00751 764 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 OR52Z1P0C646 297 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 ALAS1P13196 640 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 PLCG1P19174 1290 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 PRPHP41219 470 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 EIF1AXP47813 144 aaKnown RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 PMS1P54277 932 aaKnown RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 EPHA4P54764 986 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 HERVK_113P62684 666 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 AKAP17AQ02040 695 aaKnown RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 CUL4BQ13620 913 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 TRIM29Q14134 588 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 UGCGQ16739 394 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 PTPN21Q16825 1174 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 SKOR2Q2VWA4 1001 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 ARSHQ5FYA8 562 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 HYIQ5T013 277 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 NT5DC1Q5TFE4 455 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 PPP4R3AQ6IN85 833 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 APTXQ7Z2E3 356 aaKnown RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 FAM133AQ8N9E0 248 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 RNF214Q8ND24 703 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 BICD2Q8TD16 824 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 SLC5A5Q92911 643 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 CUL5Q93034 780 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 DNAJC19Q96DA6 116 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 PAGE5Q96GU1 130 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 WDR11Q9BZH6 1224 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 CCSER1Q9C0I3 900 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 KATNBL1Q9H079 304 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 NUP62CLQ9H1M0 184 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 DNAJC25Q9H1X3 360 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 BLZF1Q9H2G9 400 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 ZNF408Q9H9D4 720 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 CBX8Q9HC52 389 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 GBA2Q9HCG7 927 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 POLD4Q9HCU8 107 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 RNF146Q9NTX7 359 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 CYP39A1Q9NYL5 469 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 SEC63Q9UGP8 760 aaKnown RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 CCPG1Q9ULG6 757 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 MKL2Q9ULH7 1088 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-230ENST00000554673 KIF3AQ9Y496 699 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 ATP6V1DQ9Y5K8 247 aa6.6□□□□□ -1.35
ATXN3-230ENST00000554673 NPHP3-ACAD11A0A0J9YXS1 232 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 CCDC194A0A1B0GVG4 234 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 MYMKA6NI61 221 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 C19orf81C9J6K1 198 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 CXCL11O14625 94 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 TNFRSF10BO14763 440 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 CELF2O95319 508 aaKnown RBP6.59□□□□□ -1.35
ATXN3-230ENST00000554673 ARIH2O95376 493 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 EDNRBP24530 442 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 HOXD13P35453 343 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 TECP42680 631 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 MAPK7Q13164 816 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 MORC3Q14149 939 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 COG2Q14746 738 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 GRIN2CQ14957 1233 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 PGM5Q15124 567 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 SAFBQ15424 915 aaKnown RBP eCLIP6.59□□□□□ -1.35
ATXN3-230ENST00000554673 ENOX2Q16206 610 aaKnown RBP6.59□□□□□ -1.35
ATXN3-230ENST00000554673 Q4G0T1 1027 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 ANO6Q4KMQ2 910 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 ARL6IP4Q66PJ3 421 aaKnown RBP6.59□□□□□ -1.35
ATXN3-230ENST00000554673 SNRNP48Q6IEG0 339 aaKnown RBP6.59□□□□□ -1.35
ATXN3-230ENST00000554673 ALKBH2Q6NS38 261 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 C16orf46Q6P387 395 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 GADL1Q6ZQY3 521 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 LUZP1Q86V48 1076 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 IRF2BP1Q8IU81 584 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 CHURC1Q8WUH1 139 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 DHX58Q96C10 678 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 PDLIM2Q96JY6 352 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 TIGD1Q96MW7 591 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms