RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 SLC24A5Q71RS6 500 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 MIER3Q7Z3K6 550 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 P2RX5Q93086 422 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 GJA10Q969M2 543 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 NECAB3Q96P71 396 aaPredicted RBP12.54□□□□□ -0.4
ABCD4-221ENST00000554453 ADAM2Q99965 735 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 NIFKQ9BYG3 293 aaKnown RBP12.54□□□□□ -0.4
ABCD4-221ENST00000554453 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 NSUN3Q9H649 340 aaKnown RBP12.54□□□□□ -0.4
ABCD4-221ENST00000554453 C1orf112Q9NSG2 853 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 LRFN2Q9ULH4 789 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 KCNJ14Q9UNX9 436 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 PLAGL2Q9UPG8 496 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
ABCD4-221ENST00000554453 RALGAPA2Q2PPJ7 1873 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 VCANP13611 3396 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 GRM6O15303 877 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
ABCD4-221ENST00000554453 CTDNEP1O95476 244 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 CLCN3P51790 818 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 AK2P54819 239 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 NLRP11P59045 1033 aaKnown RBP12.53□□□□□ -0.4
ABCD4-221ENST00000554453 CDC42EP1Q00587 391 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 DSC3Q14574 896 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 INF2Q27J81 1249 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 XKR3Q5GH77 459 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 TCEAL5Q5H9L2 206 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 FAM228AQ86W67 206 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.53□□□□□ -0.4
ABCD4-221ENST00000554453 ETNPPLQ8TBG4 499 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 SPPL3Q8TCT6 385 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 NEK9Q8TD19 979 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 FAM20AQ96MK3 541 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 MAP7D2Q96T17 732 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 OSMRQ99650 979 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 ELAC1Q9H777 363 aaKnown RBP12.53□□□□□ -0.4
ABCD4-221ENST00000554453 MRPL42Q9Y6G3 142 aaKnown RBP12.53□□□□□ -0.4
ABCD4-221ENST00000554453 STK36Q9NRP7 1315 aa12.53□□□□□ -0.4
ABCD4-221ENST00000554453 BDP1A6H8Y1 2624 aa12.52□□□□□ -0.4
ABCD4-221ENST00000554453 CCDC194A0A1B0GVG4 234 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 DENND3A2RUS2 1198 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 CHMP2AO43633 222 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 KCNA5P22460 613 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.41
ABCD4-221ENST00000554453 PRKCEQ02156 737 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 CAMK1Q14012 370 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 UGCGQ16739 394 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 PUS10Q3MIT2 529 aaKnown RBP12.52□□□□□ -0.41
ABCD4-221ENST00000554453 WASF1Q92558 559 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 PABPC5Q96DU9 382 aaKnown RBP12.52□□□□□ -0.41
ABCD4-221ENST00000554453 CEP89Q96ST8 783 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 ORC3Q9UBD5 711 aaPredicted RBP12.52□□□□□ -0.41
ABCD4-221ENST00000554453 DDX25Q9UHL0 483 aaKnown RBP12.52□□□□□ -0.41
ABCD4-221ENST00000554453 AKT3Q9Y243 479 aa12.52□□□□□ -0.41
ABCD4-221ENST00000554453 COL4A4P53420 1690 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-221ENST00000554453 IGKV6-21A0A0C4DH24 114 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 DDX11L8A8MPP1 907 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 TBX3O15119 743 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 ITGB1P05556 798 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
ABCD4-221ENST00000554453 GCFC2P16383 781 aaKnown RBP12.51□□□□□ -0.41
ABCD4-221ENST00000554453 PSMC5P62195 406 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 TBC1D8BQ0IIM8 1120 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 ME3Q16798 604 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 CTC1Q2NKJ3 1217 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 LETM2Q2VYF4 491 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 FAM102BQ5T8I3 360 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 NEK8Q86SG6 692 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 LRRC71Q8N4P6 559 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 KLHL23Q8NBE8 558 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 PPP1R16BQ96T49 567 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 ALG13Q9NP73 1137 aaKnown RBP12.51□□□□□ -0.41
ABCD4-221ENST00000554453 KCNMB3Q9NPA1 279 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 TMEM161AQ9NX61 479 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 REV3LO60673 3130 aa12.51□□□□□ -0.41
ABCD4-221ENST00000554453 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-221ENST00000554453 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 EML1O00423 815 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 SLC37A4O43826 429 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 DARSP14868 501 aaKnown RBP12.5□□□□□ -0.41
ABCD4-221ENST00000554453 ZSCAN20P17040 1043 aaPredicted RBP12.5□□□□□ -0.41
ABCD4-221ENST00000554453 LTBRP36941 435 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 GATMP50440 423 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 GPC3P51654 580 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 PPP2R5CQ13362 524 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
ABCD4-221ENST00000554453 FAM178BQ8IXR5 827 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 HAS1Q92839 578 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 NAP1L4Q99733 375 aaKnown RBP12.5□□□□□ -0.41
ABCD4-221ENST00000554453 ATP6V0A4Q9HBG4 840 aa12.5□□□□□ -0.41
ABCD4-221ENST00000554453 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
ABCD4-221ENST00000554453 DKC1O60832 514 aaKnown RBP eCLIP12.49□□□□□ -0.41
ABCD4-221ENST00000554453 DTNBO60941 627 aa12.49□□□□□ -0.41
ABCD4-221ENST00000554453 MAFO75444 373 aaPredicted RBP12.49□□□□□ -0.41
ABCD4-221ENST00000554453 EOMESO95936 686 aa12.49□□□□□ -0.41
ABCD4-221ENST00000554453 MMP1P03956 469 aa12.49□□□□□ -0.41
ABCD4-221ENST00000554453 P4HBP07237 508 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms