RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SLC4A7Q9Y6M7 1214 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 HTTP42858 3142 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 GOLGA6L3A6NEY3 463 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PIK3R2O00459 728 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 CPLX1O14810 134 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PPFIA2O75334 1257 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 CELA2BP08218 269 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 GNAI3P08754 354 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 MSL3P1P0C860 447 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 CYBAP13498 195 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 RAC2P15153 192 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ATF7P17544 494 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 VCAM1P19320 739 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SEPHS1P49903 392 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 MMP16P51512 607 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 KIF11P52732 1056 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ERVK-9P63128 1117 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ERVK-24P63145 666 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ROR1Q01973 937 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 CACNB2Q08289 660 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 STK3Q13188 491 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SQSTM1Q13501 440 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PRPF4BQ13523 1007 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 MORC3Q14149 939 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 RRP1BQ14684 758 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PLCB4Q15147 1175 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 RILPL1Q5EBL4 403 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 TTC39AQ5SRH9 613 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ARMC4Q5T2S8 1044 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 RASIP1Q5U651 963 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 NUGGCQ68CJ6 796 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 HIBCHQ6NVY1 386 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 XRRA1Q6P2D8 792 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 C1orf228Q6PIY5 440 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 NFXL1Q6ZNB6 911 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 GADL1Q6ZQY3 521 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 CATSPERGQ6ZRH7 1159 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SV2AQ7L0J3 742 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PLEKHH3Q7Z736 793 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 FAM160A2Q8N612 972 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ENAHQ8N8S7 591 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PLPP7Q8NBV4 271 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 DIS3LQ8TF46 1054 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 BARD1Q99728 777 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 FAM167BQ9BTA0 163 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 HMG20BQ9P0W2 317 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ZNF69Q9UC07 566 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 STAP2Q9UGK3 403 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ADAMTS5Q9UNA0 930 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PHF24Q9UPV7 400 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PAXBP1Q9Y5B6 917 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 COL4A6Q14031 1691 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 GBF1Q92538 1859 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 TANC1Q9C0D5 1861 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 KIAA0355O15063 1070 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 MUSKO15146 869 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 XPOTO43592 962 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 STRNO43815 780 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 GLRX3O76003 335 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 FGFR1OPO95684 399 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 HNRNPCP07910 306 aaKnown RBP eCLIP3.03□□□□□ -1.927e-10■■□□□ 14.3
PRPF39-206ENST00000554429 UBTFL1P0CB47 393 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ELNP15502 786 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ZKSCAN1P17029 563 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 MAGEA8P43361 318 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 MAPK9P45984 424 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 USP14P54578 494 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SESN3P58005 492 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 HERVK_113P62684 666 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 GABPAQ06546 454 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 EIF2B5Q13144 721 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 LRRC26Q2I0M4 334 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 PREPLQ4J6C6 727 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 RRP12Q5JTH9 1297 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 AP1ARQ63HQ0 302 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SWSAP1Q6NVH7 229 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 C1orf122Q6ZSJ8 110 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ANKS3Q6ZW76 656 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 NEK10Q6ZWH5 1172 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 GPR142Q7Z601 462 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SRLQ86TD4 932 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 RGL4Q8IZJ4 473 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ANKRD13CQ8N6S4 541 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 MB21D1Q8N884 522 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SPATA5Q8NB90 893 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 ANKRD49Q8WVL7 239 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 SYMPKQ92797 1274 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 HPS3Q969F9 1004 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 XAGE2Q96GT9 111 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 TOX2Q96NM4 488 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 TSEN34Q9BSV6 310 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 YIPF2Q9BWQ6 316 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 TRIM55Q9BYV6 548 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 DNAJC18Q9H819 358 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 INCENPQ9NQS7 918 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 METTL5Q9NRN9 209 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 CHMP5Q9NZZ3 219 aa3.03□□□□□ -1.92
PRPF39-206ENST00000554429 DDX20Q9UHI6 824 aaKnown RBP3.03□□□□□ -1.92
PRPF39-206ENST00000554429 C2CD2Q9Y426 696 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms