RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PADI3Q9ULW8 664 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 AKT3Q9Y243 479 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 PPME1Q9Y570 386 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 NLRC5Q86WI3 1866 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 LINC01553A4QN01 128 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 RBAK-RBAKDNI3L0D1 243 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 WNT7AO00755 349 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 RPS6KA5O75582 802 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 VTNP04004 478 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 TRAPPC10P48553 1259 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 KIZQ2M2Z5 673 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 ANO5Q75V66 913 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 LRRC71Q8N4P6 559 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 NEK9Q8TD19 979 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 TMEM40Q8WWA1 233 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 ARNTL2Q8WYA1 636 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 OSMRQ99650 979 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 JPH2Q9BR39 696 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-211ENST00000554310 PCDHA12Q9UN75 941 aa14.64□□□□□ -0.07
SHMT2-211ENST00000554310 TMEM150BA6NC51 233 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 DDX11L8A8MPP1 907 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 ENPP3O14638 875 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 GPR182O15218 404 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 GPR32O75388 356 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 U2AF2P26368 475 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHMT2-211ENST00000554310 MCM7P33993 719 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 ERVK-21P61565 698 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 ADGRE1Q14246 886 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 HSCBQ8IWL3 235 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 C4orf19Q8IY42 314 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 LINC01599Q8WXQ3 324 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 MTMR9Q96QG7 549 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 TGS1Q96RS0 853 aaKnown RBP14.63□□□□□ -0.07
SHMT2-211ENST00000554310 CEP89Q96ST8 783 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 PPP1R16BQ96T49 567 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-211ENST00000554310 ZSWIM4Q9H7M6 989 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 TTC12Q9H892 705 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-211ENST00000554310 SUGCTQ9HAC7 445 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 ERVK-5Q9HDB9 667 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 CYP26B1Q9NR63 512 aa14.63□□□□□ -0.07
SHMT2-211ENST00000554310 NOL7Q9UMY1 257 aaKnown RBP14.63□□□□□ -0.07
SHMT2-211ENST00000554310 NOC2LQ9Y3T9 749 aaKnown RBP14.63□□□□□ -0.07
SHMT2-211ENST00000554310 PRRC2BQ5JSZ5 2229 aaKnown RBP14.62□□□□□ -0.07
SHMT2-211ENST00000554310 IGKV6-21A0A0C4DH24 114 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 MAFO75444 373 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-211ENST00000554310 UPP2O95045 317 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 ATP2B1P20020 1258 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 YWHABP31946 246 aaKnown RBP14.62□□□□□ -0.07
SHMT2-211ENST00000554310 RFC5P40937 340 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 TXKP42681 527 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 DNM2P50570 870 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 GPC3P51654 580 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 NLRP11P59045 1033 aaKnown RBP14.62□□□□□ -0.07
SHMT2-211ENST00000554310 CDC42EP1Q00587 391 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 NFX1Q12986 1120 aaKnown RBP14.62□□□□□ -0.07
SHMT2-211ENST00000554310 TMEM266Q2M3C6 531 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 TTC38Q5R3I4 469 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 PLA2G4FQ68DD2 849 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 NPAS4Q8IUM7 802 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 EXOC8Q8IYI6 725 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 SLC7A3Q8WY07 619 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 SCLT1Q96NL6 688 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 SAMD11Q96NU1 681 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 ADAMTS10Q9H324 1103 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 CERS4Q9HA82 394 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 CDHR5Q9HBB8 845 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 RC3H2Q9HBD1 1191 aaKnown RBP14.62□□□□□ -0.07
SHMT2-211ENST00000554310 WRAP73Q9P2S5 460 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-211ENST00000554310 ADGRA3Q8IWK6 1321 aa14.62□□□□□ -0.07
SHMT2-211ENST00000554310 EPOPA6NHQ4 379 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 GTPBP6O43824 516 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-211ENST00000554310 LYPLA2O95372 231 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 OR52Z1P0C646 297 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 STAG3L1P0CL83 205 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 POU3F3P20264 500 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-211ENST00000554310 IGFBP4P22692 258 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 CYP4A11Q02928 519 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 OTUD6AQ7L8S5 288 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 SPRED2Q7Z698 418 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 ZNF410Q86VK4 478 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 FAM228AQ86W67 206 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 DYDC2Q96IM9 177 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 HSD17B14Q9BPX1 270 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 EIF2AK1Q9BQI3 630 aaKnown RBP14.61□□□□□ -0.07
SHMT2-211ENST00000554310 TMEM60Q9H2L4 133 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 TMX1Q9H3N1 280 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 C1orf112Q9NSG2 853 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-211ENST00000554310 RGL1Q9NZL6 768 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 ST3GAL5Q9UNP4 418 aa14.61□□□□□ -0.07
SHMT2-211ENST00000554310 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-211ENST00000554310 DENND3A2RUS2 1198 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 POTEMA6NI47 508 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 GAS2O43903 313 aaKnown RBP14.6□□□□□ -0.07
SHMT2-211ENST00000554310 DARSP14868 501 aaKnown RBP14.6□□□□□ -0.07
SHMT2-211ENST00000554310 EIF4BP23588 611 aaKnown RBP14.6□□□□□ -0.07
SHMT2-211ENST00000554310 GJB2P29033 226 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 POLGP54098 1239 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-211ENST00000554310 DRP2Q13474 957 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms