RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 EHD2Q9NZN4 543 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 TARSL2A2RTX5 802 aaKnown RBP16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 KRT86O43790 486 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 ATP9AO75110 1047 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 GCNT3O95395 438 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 CCDC40Q4G0X9 1142 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 RIT2Q99578 217 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 PDCD2LQ9BRP1 358 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 FAM207AQ9NSI2 230 aaPredicted RBP16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 ZNF214Q9UL59 606 aaPredicted RBP16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 PPP2R3BQ9Y5P8 575 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 DHX15O43143 795 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 MATR3P43243 847 aaKnown RBP eCLIP16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 KRT83P78385 493 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 SLC7A5Q01650 507 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 ADAM9Q13443 819 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 EPHA7Q15375 998 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 CATSPERGQ6ZRH7 1159 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 NACC1Q96RE7 527 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 KCTD10Q9H3F6 313 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 MLXIPQ9HAP2 919 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 AGO4Q9HCK5 861 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 DMGDHQ9UI17 866 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 CAPN6Q9Y6Q1 641 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 PPP1R12BO60237 982 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 CKAP4Q07065 602 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 MOB2Q70IA6 237 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 SND1Q7KZF4 910 aaKnown RBP eCLIP16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 LRRC1Q9BTT6 524 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 MMRN2Q9H8L6 949 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 COL4A3BPQ9Y5P4 624 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 UBIAD1Q9Y5Z9 338 aa16.06■□□□□ 0.16
PPP4R3A-201ENST00000554308 GOLGA6BA6NDN3 693 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 FDX1P10109 184 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 BCRP11274 1271 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 CCT5P48643 541 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 C1orf186Q6ZWK4 172 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 AENQ8WTP8 325 aaKnown RBP16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 IKZF4Q9H2S9 585 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 SNCAIPQ9Y6H5 919 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 FAM13AO94988 1023 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 NMT1P30419 496 aaKnown RBP16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 CXCR5P32302 372 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 MAN2A1Q16706 1144 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 DNAJC21Q5F1R6 531 aaKnown RBP16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 B3GNT9Q6UX72 402 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 CREG2Q8IUH2 290 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 KSR1Q8IVT5 923 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 REPS2Q8NFH8 660 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 FAM76AQ8TAV0 307 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 C12orf42Q96LP6 360 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 GOLGA6AQ9NYA3 693 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 HOXC10Q9NYD6 342 aa16.05■□□□□ 0.16
PPP4R3A-201ENST00000554308 SORBS3O60504 671 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 NR2F2P24468 414 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 MCM3P25205 808 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 HOXD13P35453 343 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 CYLC1P35663 651 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 KNOP1Q1ED39 458 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 ZC2HC1CQ53FD0 456 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 TEX13BQ9BXU2 312 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 MAP3K20Q9NYL2 800 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 CSADQ9Y600 493 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 TMEM150BA6NC51 233 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 SPDYE16A6NNV3 312 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 EPHB6O15197 1021 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 SHOX2O60902 331 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 MOCS3O95396 460 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 NR3C2P08235 984 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 IRAK1P51617 712 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 GHRHRQ02643 423 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 PDE4CQ08493 712 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 SECISBP2LQ93073 1101 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 TCEAL9Q9UHQ7 104 aa16.04■□□□□ 0.16
PPP4R3A-201ENST00000554308 ARHGEF35A5YM69 484 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 CLIC2O15247 247 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 SP4Q02446 784 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 ICE2Q659A1 982 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 OTUD5Q96G74 571 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 CLMNQ96JQ2 1002 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 ERGIC2Q96RQ1 377 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 ELP3Q9H9T3 547 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 PARVGQ9HBI0 331 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 ZNHIT6Q9NWK9 470 aaKnown RBP16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 ADAMTS5Q9UNA0 930 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 DOCK1Q14185 1865 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 NCK2O43639 380 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 P4HBP07237 508 aaKnown RBP16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 ZBED6P86452 979 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 KIF5AQ12840 1032 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 TSEN2Q8NCE0 465 aaKnown RBP16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 EHBP1Q8NDI1 1231 aa16.03■□□□□ 0.16
PPP4R3A-201ENST00000554308 PPM1EQ8WY54 764 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms