RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ZBED9Q6R2W3 1325 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 IGKV6D-41A0A0C4DH26 115 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 TMEM232C9JQI7 657 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 H3BNC9 293 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 NKRFO15226 690 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATXN3-224ENST00000554040 H2AFB1P0C5Y9 115 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 H2AFB2P0C5Z0 115 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 BMP3P12645 472 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 ALAS1P13196 640 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 TRIM27P14373 513 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 ADD2P35612 726 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 HTRA4P83105 476 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-224ENST00000554040 RBL2Q08999 1139 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 GPM6BQ13491 265 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 SLFN13Q68D06 897 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 LRRC8DQ7L1W4 858 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 RPAINQ86UA6 219 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 GMCL1P1Q8NEA9 526 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 FAM200AQ8TCP9 573 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 CHURC1Q8WUH1 139 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 STAG1Q8WVM7 1258 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
ATXN3-224ENST00000554040 TTC9Q92623 222 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 ATOH1Q92858 354 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-224ENST00000554040 SAMD11Q96NU1 681 aa8.14□□□□□ -1.11
ATXN3-224ENST00000554040 RAD50Q92878 1312 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 LOC102724159A0A0B4J2E5 919 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 PROB1E7EW31 1015 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 STXBP3O00186 592 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 MBTPS2O43462 519 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 TTLL1O95922 423 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 RARAP10276 462 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 CKBP12277 381 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 STAT2P52630 851 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 ZXDAP98168 799 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 PWP2Q15269 919 aaKnown RBP8.13□□□□□ -1.11
ATXN3-224ENST00000554040 SBK1Q52WX2 424 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 MUM1L1Q5H9M0 696 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 FAM26DQ5JW98 314 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 COX20Q5RI15 118 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 GDF6Q6KF10 455 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-224ENST00000554040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-224ENST00000554040 FAM160B2Q86V87 743 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 SESTD1Q86VW0 696 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
ATXN3-224ENST00000554040 FBXL6Q8N531 539 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 DNAJC2Q99543 621 aaKnown RBP8.13□□□□□ -1.11
ATXN3-224ENST00000554040 MTMR4Q9NYA4 1195 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 ADD3Q9UEY8 706 aaKnown RBP8.13□□□□□ -1.11
ATXN3-224ENST00000554040 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 TNNQ9UQP3 1299 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 KCNMB2Q9Y691 235 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 SLC4A4Q9Y6R1 1079 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 EP300Q09472 2414 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-224ENST00000554040 SCN10AQ9Y5Y9 1956 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 EPG5Q9HCE0 2579 aa8.13□□□□□ -1.11
ATXN3-224ENST00000554040 DNAH14Q0VDD8 3507 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 PLA2G6O60733 806 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 DEAF1O75398 565 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 AMHP03971 560 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 AVPR2P30518 371 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 ALDH5A1P51649 535 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 CHMP4BP1P59074 171 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 NRG1Q02297 640 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 DLX2Q07687 328 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 SMAD4Q13485 552 aaKnown RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 BAATQ14032 418 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 UBE3CQ15386 1083 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 CLUL1Q15846 466 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 PCSK7Q16549 785 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 OCLNQ16625 522 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 NSMFQ6X4W1 530 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 TREML1Q86YW5 311 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 ERC1Q8IUD2 1116 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 TMEM192Q8IY95 271 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 MYOCDQ8IZQ8 938 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 ZNF444Q8N0Y2 327 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 STK11IPQ8N1F8 1099 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 DTWD1Q8N5C7 304 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 TMEM57Q8N5G2 664 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 COPS5Q92905 334 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
ATXN3-224ENST00000554040 ARPP21Q9UBL0 812 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 NOVA2Q9UNW9 492 aaKnown RBP8.12□□□□□ -1.11
ATXN3-224ENST00000554040 LOC730098B7Z3J9 87 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 CHGBP05060 677 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 SLC1A4P43007 532 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 ID4P47928 161 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 NRLP54845 237 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 VCPP55072 806 aaKnown RBP8.11□□□□□ -1.11
ATXN3-224ENST00000554040 SNAP25P60880 206 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 SIGLEC14Q08ET2 396 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 HYAL1Q12794 435 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 IKQ13123 557 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-224ENST00000554040 PPP2R5BQ15173 497 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 ASCL5Q7RTU5 278 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 SCFD2Q8WU76 684 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 KAT2BQ92831 832 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms