RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 SERINC5Q86VE9 423 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 VTI1AQ96AJ9 217 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 TNMDQ9H2S6 317 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 TRMT13Q9NUP7 481 aaKnown RBP20.08■□□□□ 0.81
PSEN1-208ENST00000553719 KCND2Q9NZV8 630 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 SERTAD1Q9UHV2 236 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 TUBE1Q9UJT0 475 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 ARHGEF35A5YM69 484 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 B4GALT4O60513 344 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 GNAT1P11488 350 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 KLRC1P26715 233 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 TBC1D8BQ0IIM8 1120 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 EMC2Q15006 297 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 LRRC26Q2I0M4 334 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 FAM47CQ5HY64 1035 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 KRBA2Q6ZNG9 492 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 GPT2Q8TD30 523 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 TIGD1Q96MW7 591 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 TOX2Q96NM4 488 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 PCDHA2Q9Y5H9 948 aa20.07■□□□□ 0.8
PSEN1-208ENST00000553719 MROH7Q68CQ1 1323 aa20.06■□□□□ 0.8
PSEN1-208ENST00000553719 MAGEB2O15479 319 aa20.06■□□□□ 0.8
PSEN1-208ENST00000553719 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
PSEN1-208ENST00000553719 GUCY2CP25092 1073 aa20.06■□□□□ 0.8
PSEN1-208ENST00000553719 ATN1P54259 1190 aaPredicted RBP20.06■□□□□ 0.8
PSEN1-208ENST00000553719 CNNM4Q6P4Q7 775 aa20.06■□□□□ 0.8
PSEN1-208ENST00000553719 RUFY4Q6ZNE9 571 aa20.06■□□□□ 0.8
PSEN1-208ENST00000553719 EVPLQ92817 2033 aa20.06■□□□□ 0.8
PSEN1-208ENST00000553719 WNT8BQ93098 351 aa20.06■□□□□ 0.8
PSEN1-208ENST00000553719 CCDC43Q96MW1 224 aaKnown RBP20.06■□□□□ 0.8
PSEN1-208ENST00000553719 ATP6V0A4Q9HBG4 840 aa20.06■□□□□ 0.8
PSEN1-208ENST00000553719 SMIM35A0A1B0GVV1 85 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 MYMKA6NI61 221 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 CCDC85CA6NKD9 419 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 GAS2O43903 313 aaKnown RBP20.05■□□□□ 0.8
PSEN1-208ENST00000553719 POLGP54098 1239 aaPredicted RBP20.05■□□□□ 0.8
PSEN1-208ENST00000553719 MAPK7Q13164 816 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 DRP2Q13474 957 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 PTGISQ16647 500 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 TRIM71Q2Q1W2 868 aaKnown RBP20.05■□□□□ 0.8
PSEN1-208ENST00000553719 TRIM60Q495X7 471 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 SV2BQ7L1I2 683 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 RPAINQ86UA6 219 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 GPBP1Q86WP2 473 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 EXOC8Q8IYI6 725 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 DAW1Q8N136 415 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 SLC7A3Q8WY07 619 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 DHX38Q92620 1227 aaKnown RBP20.05■□□□□ 0.8
PSEN1-208ENST00000553719 DNAJC19Q96DA6 116 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 TRPV6Q9H1D0 765 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 DACT1Q9NYF0 836 aa20.05■□□□□ 0.8
PSEN1-208ENST00000553719 RTP1P59025 263 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 RBL2Q08999 1139 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 TAF2Q6P1X5 1199 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 ELOA2Q8IYF1 753 aaPredicted RBP20.04■□□□□ 0.8
PSEN1-208ENST00000553719 CEP57L1Q8IYX8 460 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 KIAA0319LQ8IZA0 1049 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 LRRC71Q8N4P6 559 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 MCPH1Q8NEM0 835 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 PAGE5Q96GU1 130 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 JPH2Q9BR39 696 aaPredicted RBP20.04■□□□□ 0.8
PSEN1-208ENST00000553719 TIPINQ9BVW5 301 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 TRIM9Q9C026 710 aa20.04■□□□□ 0.8
PSEN1-208ENST00000553719 BMP2KQ9NSY1 1161 aaPredicted RBP20.04■□□□□ 0.8
PSEN1-208ENST00000553719 FRMD3A2A2Y4 597 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 SSBP05455 408 aaKnown RBP eCLIP20.03■□□□□ 0.8
PSEN1-208ENST00000553719 CYP2C9P11712 490 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 ARL2P36404 184 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 CLCN3P51790 818 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 MDM2Q00987 491 aaPredicted RBP20.03■□□□□ 0.8
PSEN1-208ENST00000553719 TLE2Q04725 743 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 PTK7Q13308 1070 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 DHX8Q14562 1220 aaKnown RBP20.03■□□□□ 0.8
PSEN1-208ENST00000553719 EFCAB12Q6NXP0 572 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 GRAMD1CQ8IYS0 662 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 CNNM3Q8NE01 707 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 STAMQ92783 540 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 C7orf25Q9BPX7 421 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 REEP2Q9BRK0 252 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 GPRC5CQ9NQ84 441 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 SIP14410 1827 aa20.03■□□□□ 0.8
PSEN1-208ENST00000553719 NPHP3-ACAD11A0A0J9YXS1 232 aa20.02■□□□□ 0.8
PSEN1-208ENST00000553719 PQBP1O60828 265 aaKnown RBP20.02■□□□□ 0.8
PSEN1-208ENST00000553719 MBD3O95983 291 aa20.02■□□□□ 0.8
PSEN1-208ENST00000553719 ZNF131P52739 623 aa20.02■□□□□ 0.8
PSEN1-208ENST00000553719 FAAP100Q0VG06 881 aa20.02■□□□□ 0.8
PSEN1-208ENST00000553719 GIT2Q14161 759 aa20.02■□□□□ 0.8
PSEN1-208ENST00000553719 RETREG2Q8NC44 543 aa20.02■□□□□ 0.8
PSEN1-208ENST00000553719 DDX12PQ92771 950 aa20.02■□□□□ 0.8
PSEN1-208ENST00000553719 ODF2LQ9ULJ1 636 aa20.02■□□□□ 0.8
PSEN1-208ENST00000553719 KINO60870 393 aaKnown RBP20.01■□□□□ 0.79
PSEN1-208ENST00000553719 HIP1RO75146 1068 aa20.01■□□□□ 0.79
PSEN1-208ENST00000553719 MYL1P05976 194 aa20.01■□□□□ 0.79
PSEN1-208ENST00000553719 CUL4BQ13620 913 aa20.01■□□□□ 0.79
PSEN1-208ENST00000553719 IER5Q5VY09 327 aa20.01■□□□□ 0.79
PSEN1-208ENST00000553719 KANK3Q6NY19 840 aa20.01■□□□□ 0.79
PSEN1-208ENST00000553719 TRAF7Q6Q0C0 670 aa20.01■□□□□ 0.79
PSEN1-208ENST00000553719 TMEM143Q96AN5 459 aa20.01■□□□□ 0.79
PSEN1-208ENST00000553719 LRRC27Q9C0I9 530 aa20.01■□□□□ 0.79
PSEN1-208ENST00000553719 TBX21Q9UL17 535 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms