RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 PPIGQ13427 754 aaKnown RBP eCLIP15.43■□□□□ 0.06
TUBB3-202ENST00000553656 ZNF618Q5T7W0 954 aa15.43■□□□□ 0.06
TUBB3-202ENST00000553656 LRRC71Q8N4P6 559 aa15.43■□□□□ 0.06
TUBB3-202ENST00000553656 SCLT1Q96NL6 688 aa15.43■□□□□ 0.06
TUBB3-202ENST00000553656 MTRQ99707 1265 aa15.43■□□□□ 0.06
TUBB3-202ENST00000553656 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
TUBB3-202ENST00000553656 CCSER1Q9C0I3 900 aa15.43■□□□□ 0.06
TUBB3-202ENST00000553656 WNT8AQ9H1J5 351 aa15.43■□□□□ 0.06
TUBB3-202ENST00000553656 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
TUBB3-202ENST00000553656 LTBP2Q14767 1821 aa15.43■□□□□ 0.06
TUBB3-202ENST00000553656 PDE4DIPQ5VU43 2346 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 A0A087WWV3 80 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 ZBTB39O15060 712 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 MAFO75444 373 aaPredicted RBP15.42■□□□□ 0.06
TUBB3-202ENST00000553656 CSF2RAP15509 400 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 MRPS6P82932 125 aaKnown RBP15.42■□□□□ 0.06
TUBB3-202ENST00000553656 EMC2Q15006 297 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 ECM1Q16610 540 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 SPECC1Q5M775 1068 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 HYIQ5T013 277 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 PRPF38BQ5VTL8 546 aaKnown RBP15.42■□□□□ 0.06
TUBB3-202ENST00000553656 RPUSD2Q8IZ73 545 aaKnown RBP15.42■□□□□ 0.06
TUBB3-202ENST00000553656 ZNF710Q8N1W2 664 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
TUBB3-202ENST00000553656 TCP11Q8WWU5 503 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 SYMPKQ92797 1274 aaKnown RBP15.42■□□□□ 0.06
TUBB3-202ENST00000553656 SCLYQ96I15 445 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 PLIN2Q99541 437 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 BHMT2Q9H2M3 363 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 BMP2KQ9NSY1 1161 aaPredicted RBP15.42■□□□□ 0.06
TUBB3-202ENST00000553656 RCOR1Q9UKL0 485 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 TRPV2Q9Y5S1 764 aa15.42■□□□□ 0.06
TUBB3-202ENST00000553656 USO1O60763 962 aaKnown RBP15.41■□□□□ 0.06
TUBB3-202ENST00000553656 EYA4O95677 639 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 SSBP05455 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
TUBB3-202ENST00000553656 PFKMP08237 780 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 CDC42EP1Q00587 391 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 TMEM62Q0P6H9 643 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 GRB10Q13322 594 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 KARSQ15046 597 aaKnown RBP15.41■□□□□ 0.06
TUBB3-202ENST00000553656 KIAA0319LQ8IZA0 1049 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 LEO1Q8WVC0 666 aaPredicted RBP15.41■□□□□ 0.06
TUBB3-202ENST00000553656 PSPC1Q8WXF1 523 aaKnown RBP15.41■□□□□ 0.06
TUBB3-202ENST00000553656 EPSTI1Q96J88 318 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 CEP89Q96ST8 783 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 UBE2OQ9C0C9 1292 aaKnown RBP15.41■□□□□ 0.06
TUBB3-202ENST00000553656 DHX33Q9H6R0 707 aaKnown RBP15.41■□□□□ 0.06
TUBB3-202ENST00000553656 SUCLA2Q9P2R7 463 aaPredicted RBP15.41■□□□□ 0.06
TUBB3-202ENST00000553656 GINS2Q9Y248 185 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 CDY2AQ9Y6F7 541 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 TANC1Q9C0D5 1861 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 DNAH12Q6ZR08 3092 aa15.41■□□□□ 0.06
TUBB3-202ENST00000553656 ARID2Q68CP9 1835 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 IGKV6-21A0A0C4DH24 114 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 E9PMD0 336 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 VTNP04004 478 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 PLCG1P19174 1290 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 TMEM119Q4V9L6 283 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 FAM26DQ5JW98 314 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 PSRC1Q6PGN9 363 aaPredicted RBP15.4■□□□□ 0.06
TUBB3-202ENST00000553656 PADI6Q6TGC4 694 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 CCDC73Q6ZRK6 1079 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 DEFB128Q7Z7B8 93 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 MCPH1Q8NEM0 835 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 PNMA5Q96PV4 448 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 CELF4Q9BZC1 486 aaKnown RBP15.4■□□□□ 0.06
TUBB3-202ENST00000553656 IL23AQ9NPF7 189 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 FAM13BQ9NYF5 915 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 PCDH10Q9P2E7 1040 aa15.4■□□□□ 0.06
TUBB3-202ENST00000553656 LOXHD1Q8IVV2 1947 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 CHRNA1P02708 482 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 ACTN1P12814 892 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 CSPP1Q1MSJ5 1256 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 RRAGBQ5VZM2 374 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 RHPN2Q8IUC4 686 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 LINC01465Q8N7H1 131 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 NLRP7Q8WX94 980 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 TMEM143Q96AN5 459 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 CHAMP1Q96JM3 812 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 PPP1R16BQ96T49 567 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 STK17AQ9UEE5 414 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 PCDHA7Q9UN72 937 aa15.39■□□□□ 0.05
TUBB3-202ENST00000553656 PLA2G4BP0C869 781 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 ACRP10323 421 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 CYP11B2P19099 503 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 STAT6P42226 847 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 NLRP11P59045 1033 aaKnown RBP15.38■□□□□ 0.05
TUBB3-202ENST00000553656 MGAT3Q09327 533 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 DRP2Q13474 957 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 MXD4Q14582 209 aaPredicted RBP15.38■□□□□ 0.05
TUBB3-202ENST00000553656 KIZQ2M2Z5 673 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 FAM102BQ5T8I3 360 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 TRAF7Q6Q0C0 670 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 MAEAQ7L5Y9 396 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 KCNK18Q7Z418 384 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 USP38Q8NB14 1042 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 SEPT8Q92599 483 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 NLRP4Q96MN2 994 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms