RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 KDM3AQ9Y4C1 1321 aa20.53■□□□□ 0.88
SHMT2-206ENST00000553529 ZBTB39O15060 712 aa20.53■□□□□ 0.88
SHMT2-206ENST00000553529 GTPBP6O43824 516 aaPredicted RBP20.53■□□□□ 0.88
SHMT2-206ENST00000553529 KRT2P35908 639 aa20.53■□□□□ 0.88
SHMT2-206ENST00000553529 JAK3P52333 1124 aa20.53■□□□□ 0.88
SHMT2-206ENST00000553529 NLRP11P59045 1033 aaKnown RBP20.53■□□□□ 0.88
SHMT2-206ENST00000553529 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
SHMT2-206ENST00000553529 ZNF689Q96CS4 500 aaPredicted RBP20.53■□□□□ 0.88
SHMT2-206ENST00000553529 ADAMTS10Q9H324 1103 aa20.53■□□□□ 0.88
SHMT2-206ENST00000553529 AKT3Q9Y243 479 aa20.53■□□□□ 0.88
SHMT2-206ENST00000553529 MRPL42Q9Y6G3 142 aaKnown RBP20.53■□□□□ 0.88
SHMT2-206ENST00000553529 RALGAPA2Q2PPJ7 1873 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 A0A087WWV3 80 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 RPS6KA5O75582 802 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 DGKIO75912 1065 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 MMP1P03956 469 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 NPEPPSP55786 919 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 TARBP2Q15633 366 aaKnown RBP20.52■□□□□ 0.88
SHMT2-206ENST00000553529 MOXD1Q6UVY6 613 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 ANO5Q75V66 913 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 DIS3L2Q8IYB7 885 aaKnown RBP20.52■□□□□ 0.88
SHMT2-206ENST00000553529 C22orf23Q9BZE7 217 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 TSPYL2Q9H2G4 693 aaPredicted RBP20.52■□□□□ 0.88
SHMT2-206ENST00000553529 RGL1Q9NZL6 768 aa20.52■□□□□ 0.88
SHMT2-206ENST00000553529 CD2BP2O95400 341 aaKnown RBP20.51■□□□□ 0.87
SHMT2-206ENST00000553529 SFNP31947 248 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 CTNNB1P35222 781 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 SPIRE1Q08AE8 756 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 NCAPH2Q6IBW4 605 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 KSR1Q8IVT5 923 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 NME8Q8N427 588 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 FIBCD1Q8N539 461 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 ASB2Q96Q27 587 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 ADAM2Q99965 735 aa20.51■□□□□ 0.87
SHMT2-206ENST00000553529 DDX11L8A8MPP1 907 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 GRM6O15303 877 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 FGFR1P11362 822 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 ATP2B1P20020 1258 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 CYP4A11Q02928 519 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 GPM6BQ13491 265 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 BTG3Q14201 252 aaPredicted RBP20.5■□□□□ 0.87
SHMT2-206ENST00000553529 CTTNQ14247 550 aaKnown RBP20.5■□□□□ 0.87
SHMT2-206ENST00000553529 TJAP1Q5JTD0 557 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 FAM102BQ5T8I3 360 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 TNPO1Q92973 898 aaKnown RBP20.5■□□□□ 0.87
SHMT2-206ENST00000553529 FAM167AQ96KS9 214 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 PCDHGC5Q9Y5F6 944 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 ARID2Q68CP9 1835 aa20.5■□□□□ 0.87
SHMT2-206ENST00000553529 FNDC1Q4ZHG4 1894 aaPredicted RBP20.5■□□□□ 0.87
SHMT2-206ENST00000553529 XBP1P17861 261 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 GPC3P51654 580 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 TBC1D8BQ0IIM8 1120 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 PPP2R5CQ13362 524 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 PPP4R3AQ6IN85 833 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 DYDC2Q96IM9 177 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 TMEM60Q9H2L4 133 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 ALG13Q9NP73 1137 aaKnown RBP20.49■□□□□ 0.87
SHMT2-206ENST00000553529 NRBP2Q9NSY0 501 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 LIMCH1Q9UPQ0 1083 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 SQORQ9Y6N5 450 aa20.49■□□□□ 0.87
SHMT2-206ENST00000553529 PLXNA4Q9HCM2 1894 aa20.48■□□□□ 0.87
SHMT2-206ENST00000553529 DNAJB1P25685 340 aa20.48■□□□□ 0.87
SHMT2-206ENST00000553529 CRYBB1P53674 252 aaPredicted RBP20.48■□□□□ 0.87
SHMT2-206ENST00000553529 DSC3Q14574 896 aa20.48■□□□□ 0.87
SHMT2-206ENST00000553529 NIFKQ9BYG3 293 aaKnown RBP20.48■□□□□ 0.87
SHMT2-206ENST00000553529 RNF19AQ9NV58 838 aa20.48■□□□□ 0.87
SHMT2-206ENST00000553529 CEP131Q9UPN4 1083 aa20.48■□□□□ 0.87
SHMT2-206ENST00000553529 C9IYK1 514 aa20.47■□□□□ 0.87
SHMT2-206ENST00000553529 H3BNC9 293 aa20.47■□□□□ 0.87
SHMT2-206ENST00000553529 GTF2F1P35269 517 aaKnown RBP eCLIP20.47■□□□□ 0.87
SHMT2-206ENST00000553529 CAMK1Q14012 370 aa20.47■□□□□ 0.87
SHMT2-206ENST00000553529 NBR1Q14596 966 aa20.47■□□□□ 0.87
SHMT2-206ENST00000553529 XKR3Q5GH77 459 aa20.47■□□□□ 0.87
SHMT2-206ENST00000553529 NPAS4Q8IUM7 802 aa20.47■□□□□ 0.87
SHMT2-206ENST00000553529 FAM177A1Q8N128 213 aaPredicted RBP20.47■□□□□ 0.87
SHMT2-206ENST00000553529 ADAMTS19Q8TE59 1207 aa20.47■□□□□ 0.87
SHMT2-206ENST00000553529 ATXN2LQ8WWM7 1075 aaKnown RBP20.47■□□□□ 0.87
SHMT2-206ENST00000553529 WASF1Q92558 559 aa20.47■□□□□ 0.87
SHMT2-206ENST00000553529 DENND3A2RUS2 1198 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 MAGEB2O15479 319 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 BMP1P13497 986 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 BMPR1AP36894 532 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 SARSP49591 514 aaKnown RBP20.46■□□□□ 0.87
SHMT2-206ENST00000553529 PSMC5P62195 406 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 MRPS5P82675 430 aaKnown RBP20.46■□□□□ 0.87
SHMT2-206ENST00000553529 LONRF3Q496Y0 759 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 TCEAL5Q5H9L2 206 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 RDM1Q8NG50 284 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 MAP7D2Q96T17 732 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 LXNQ9BS40 222 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 FTHL17Q9BXU8 183 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 RGS18Q9NS28 235 aa20.46■□□□□ 0.87
SHMT2-206ENST00000553529 A0A087WZ62 844 aa20.45■□□□□ 0.86
SHMT2-206ENST00000553529 IGKV6-21A0A0C4DH24 114 aa20.45■□□□□ 0.86
SHMT2-206ENST00000553529 POTEMA6NI47 508 aa20.45■□□□□ 0.86
SHMT2-206ENST00000553529 GCFC2P16383 781 aaKnown RBP20.45■□□□□ 0.86
SHMT2-206ENST00000553529 NLRP7Q8WX94 980 aa20.45■□□□□ 0.86
SHMT2-206ENST00000553529 TMEM143Q96AN5 459 aa20.45■□□□□ 0.86
SHMT2-206ENST00000553529 FAM20AQ96MK3 541 aa20.45■□□□□ 0.86
SHMT2-206ENST00000553529 SCLT1Q96NL6 688 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms