RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 NUCKS1Q9H1E3 243 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 VPS16Q9H269 839 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 SEMA6BQ9H3T3 888 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 ZSWIM4Q9H7M6 989 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 KCNH7Q9NS40 1196 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 ZNHIT6Q9NWK9 470 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TAB2Q9NYJ8 693 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 GMPR2Q9P2T1 348 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 FBXO40Q9UH90 709 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 DBR1Q9UK59 544 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 CAPN11Q9UMQ6 739 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 MAPK8IP1Q9UQF2 711 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TRAF3IP3Q9Y228 551 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 R3HCC1Q9Y3T6 440 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 AFG3L2Q9Y4W6 797 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 PCDHA2Q9Y5H9 948 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 CSADQ9Y600 493 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TRIM49BA6NDI0 452 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 NFIBO00712 420 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 PDXKO00764 312 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 CXCL11O14625 94 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 CETN3O15182 167 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 CAPN5O15484 640 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 CALUO43852 315 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 GYPCP04921 128 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 SSBP05455 408 aaKnown RBP eCLIP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 CCDC175P0C221 793 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 CCND2P30279 289 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 STAT3P40763 770 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 EPS15P42566 896 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 MTIF2P46199 727 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 ZNF131P52739 623 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 PMS1P54277 932 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 RPS6P62753 249 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 CDK17Q00537 523 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 KRT76Q01546 638 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 PPATQ06203 517 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 RBL2Q08999 1139 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 TBC1D8BQ0IIM8 1120 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 MTMR1Q13613 665 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 MYBPC2Q14324 1141 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 SYCP1Q15431 976 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 VWA3BQ502W6 1294 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 HSP90AA4PQ58FG1 418 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 ARSHQ5FYA8 562 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 LBX2Q6XYB7 198 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 EPM2AIP1Q7L775 607 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 SMAP1Q8IYB5 467 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 REPS2Q8NFH8 660 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 DNERQ8NFT8 737 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 OR8K1Q8NGG5 319 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 ADAM32Q8TC27 787 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 NSUN6Q8TEA1 469 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 TBC1D5Q92609 795 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 ZKSCAN4Q969J2 545 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 PPP1R13BQ96KQ4 1090 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 IWS1Q96ST2 819 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 RMDN3Q96TC7 470 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 DNAJC7Q99615 494 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 PDCD2LQ9BRP1 358 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 FHDC1Q9C0D6 1143 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 ACAD9Q9H845 621 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 METTL14Q9HCE5 456 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 RAVER2Q9HCJ3 691 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 AGO4Q9HCK5 861 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 PXMP2Q9NR77 195 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 RNF146Q9NTX7 359 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 ABHD10Q9NUJ1 306 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 CGNQ9P2M7 1197 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 KCNG1Q9UIX4 513 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 LUC7L2Q9Y383 392 aaKnown RBP8.07□□□□□ -1.12
ATXN3-221ENST00000553498 DAAM1Q9Y4D1 1078 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 MYH6P13533 1939 aa8.07□□□□□ -1.12
ATXN3-221ENST00000553498 BRCA1P38398 1863 aaKnown RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 PFASO15067 1338 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ASTN2O75129 1339 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 PHLPP2Q6ZVD8 1323 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 WDR64B1ANS9 1081 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 B4DLN1 442 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 SLC16A3O15427 465 aaKnown RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 USP2O75604 605 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ITGB5P18084 799 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 CASP14P31944 242 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 QARSP47897 775 aaKnown RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 HIRAP54198 1017 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ETF1P62495 437 aaKnown RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ZBED6P86452 979 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 PABPC4Q13310 644 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 TUBB2AQ13885 445 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 PGM5Q15124 567 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 KNOP1Q1ED39 458 aaKnown RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 GNPTABQ3T906 1256 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ARHGEF16Q5VV41 709 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ZNF746Q6NUN9 644 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ZNF662Q6ZS27 426 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 LRRC55Q6ZSA7 311 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 C1orf186Q6ZWK4 172 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 VASH1Q7L8A9 365 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 MIER3Q7Z3K6 550 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 TRIM46Q7Z4K8 759 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms