RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 RAB30Q15771 203 aa20.64■□□□□ 0.89
CPSF2-202ENST00000553427 HAUS3Q68CZ6 603 aa20.64■□□□□ 0.89
CPSF2-202ENST00000553427 TPH2Q8IWU9 490 aa20.64■□□□□ 0.89
CPSF2-202ENST00000553427 LRRC71Q8N4P6 559 aa20.64■□□□□ 0.89
CPSF2-202ENST00000553427 DHX33Q9H6R0 707 aaKnown RBP20.64■□□□□ 0.89
CPSF2-202ENST00000553427 MTMR6Q9Y217 621 aa20.64■□□□□ 0.89
CPSF2-202ENST00000553427 GPR32O75388 356 aa20.63■□□□□ 0.89
CPSF2-202ENST00000553427 DNAJB2P25686 324 aa20.63■□□□□ 0.89
CPSF2-202ENST00000553427 CRYBB1P53674 252 aaPredicted RBP20.63■□□□□ 0.89
CPSF2-202ENST00000553427 CDC42EP1Q00587 391 aa20.63■□□□□ 0.89
CPSF2-202ENST00000553427 RESTQ13127 1097 aa20.63■□□□□ 0.89
CPSF2-202ENST00000553427 ARL6IP4Q66PJ3 421 aaKnown RBP20.63■□□□□ 0.89
CPSF2-202ENST00000553427 SLC7A3Q8WY07 619 aa20.63■□□□□ 0.89
CPSF2-202ENST00000553427 CEP170P1Q96L14 293 aa20.63■□□□□ 0.89
CPSF2-202ENST00000553427 PBX4Q9BYU1 374 aa20.63■□□□□ 0.89
CPSF2-202ENST00000553427 AGO3Q9H9G7 860 aaKnown RBP20.63■□□□□ 0.89
CPSF2-202ENST00000553427 PCDHA11Q9Y5I1 949 aa20.63■□□□□ 0.89
CPSF2-202ENST00000553427 MICAL3Q7RTP6 2002 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 GRXCR1A8MXD5 290 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 STX6O43752 255 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 VTNP04004 478 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 DNM2P50570 870 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 NPEPPSP55786 919 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 CATSPER3Q86XQ3 398 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 HERC6Q8IVU3 1022 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 FTHL17Q9BXU8 183 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 ADAMTS10Q9H324 1103 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 SUGCTQ9HAC7 445 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 FOXD4L1Q9NU39 408 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 AKT3Q9Y243 479 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 CHD9Q3L8U1 2897 aa20.62■□□□□ 0.89
CPSF2-202ENST00000553427 EVPLQ92817 2033 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 MED24O75448 989 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 DEFB103AP81534 67 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 PAK2Q13177 524 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 KIZQ2M2Z5 673 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 ODR4Q5SWX8 454 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 DTHD1Q6ZMT9 781 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 FERMT3Q86UX7 667 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
CPSF2-202ENST00000553427 TIFAQ96CG3 184 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 SH2D3AQ9BRG2 576 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 LRWD1Q9UFC0 647 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 MSRAQ9UJ68 235 aa20.61■□□□□ 0.89
CPSF2-202ENST00000553427 DBR1Q9UK59 544 aaKnown RBP20.61■□□□□ 0.89
CPSF2-202ENST00000553427 AMHP03971 560 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 HSP90AA1P07900 732 aaKnown RBP20.6■□□□□ 0.89
CPSF2-202ENST00000553427 CD52P31358 61 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 RARRES1P49788 294 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 GPC3P51654 580 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 POLGP54098 1239 aaPredicted RBP20.6■□□□□ 0.89
CPSF2-202ENST00000553427 NLRP11P59045 1033 aaKnown RBP20.6■□□□□ 0.89
CPSF2-202ENST00000553427 DRP2Q13474 957 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 IL17AQ16552 155 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 XKR9Q5GH70 373 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 TMEM40Q8WWA1 233 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 NACC1Q96RE7 527 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 ZSCAN16Q9H4T2 348 aaPredicted RBP20.6■□□□□ 0.89
CPSF2-202ENST00000553427 CDHR5Q9HBB8 845 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 ERVK-5Q9HDB9 667 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 PADI3Q9ULW8 664 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 ARID2Q68CP9 1835 aa20.6■□□□□ 0.89
CPSF2-202ENST00000553427 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.59■□□□□ 0.89
CPSF2-202ENST00000553427 ZBTB39O15060 712 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 DGAT1O75907 488 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 GJB5O95377 273 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 PBX2P40425 430 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 EMC2Q15006 297 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 ZNF697Q5TEC3 545 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.59■□□□□ 0.89
CPSF2-202ENST00000553427 ZNF410Q86VK4 478 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 TCP11Q8WWU5 503 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 OSMRQ99650 979 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 SUCLA2Q9P2R7 463 aaPredicted RBP20.59■□□□□ 0.89
CPSF2-202ENST00000553427 GINS2Q9Y248 185 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 NOC2LQ9Y3T9 749 aaKnown RBP20.59■□□□□ 0.89
CPSF2-202ENST00000553427 PTPRSQ13332 1948 aa20.59■□□□□ 0.89
CPSF2-202ENST00000553427 GPR182O15218 404 aa20.58■□□□□ 0.89
CPSF2-202ENST00000553427 RPS6KA5O75582 802 aa20.58■□□□□ 0.89
CPSF2-202ENST00000553427 EIF4BP23588 611 aaKnown RBP20.58■□□□□ 0.89
CPSF2-202ENST00000553427 POTEGQ6S5H5 508 aa20.58■□□□□ 0.89
CPSF2-202ENST00000553427 PSPC1Q8WXF1 523 aaKnown RBP20.58■□□□□ 0.89
CPSF2-202ENST00000553427 CCDC43Q96MW1 224 aaKnown RBP20.58■□□□□ 0.89
CPSF2-202ENST00000553427 TSPYL2Q9H2G4 693 aaPredicted RBP20.58■□□□□ 0.89
CPSF2-202ENST00000553427 YBX2Q9Y2T7 364 aaKnown RBP20.58■□□□□ 0.89
CPSF2-202ENST00000553427 MORC2Q9Y6X9 1032 aaPredicted RBP20.58■□□□□ 0.89
CPSF2-202ENST00000553427 COL4A6Q14031 1691 aa20.58■□□□□ 0.88
CPSF2-202ENST00000553427 SLC26A4O43511 780 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 DARSP14868 501 aaKnown RBP20.57■□□□□ 0.88
CPSF2-202ENST00000553427 CCT6AP40227 531 aaKnown RBP20.57■□□□□ 0.88
CPSF2-202ENST00000553427 RABGGTBP53611 331 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 KRT79Q5XKE5 535 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 FAM228AQ86W67 206 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 KCTD17Q8N5Z5 321 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 DEFB123Q8N688 67 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 SNX29Q8TEQ0 813 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 PIGOQ8TEQ8 1089 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 LINC01599Q8WXQ3 324 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 TOP1MTQ969P6 601 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 AK8Q96MA6 479 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms