RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 ZSCAN32Q9NX65 697 aa7.79□□□□□ -1.16
LETMD1-236ENST00000553043 FBXO4Q9UKT5 387 aa7.79□□□□□ -1.16
LETMD1-236ENST00000553043 GINS2Q9Y248 185 aa7.79□□□□□ -1.16
LETMD1-236ENST00000553043 TRPV2Q9Y5S1 764 aa7.79□□□□□ -1.16
LETMD1-236ENST00000553043 SQORQ9Y6N5 450 aa7.79□□□□□ -1.16
LETMD1-236ENST00000553043 FLNBO75369 2602 aaKnown RBP7.79□□□□□ -1.16
LETMD1-236ENST00000553043 IGSF9BQ9UPX0 1349 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 SETXQ7Z333 2677 aaKnown RBP7.78□□□□□ -1.16
LETMD1-236ENST00000553043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.78□□□□□ -1.16
LETMD1-236ENST00000553043 ORC4O43929 436 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 DHX16O60231 1041 aaKnown RBP7.78□□□□□ -1.16
LETMD1-236ENST00000553043 SNHG28P0DPA3 235 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 MX1P20591 662 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 CCND2P30279 289 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 PPM1AP35813 382 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 RING1Q06587 406 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 NEDD9Q14511 834 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 BMS1Q14692 1282 aaKnown RBP7.78□□□□□ -1.16
LETMD1-236ENST00000553043 QRICH1Q2TAL8 776 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 LETM2Q2VYF4 491 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 IL31Q6EBC2 164 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 UNQ6494/PRO21346Q6UXR6 183 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 SLC24A5Q71RS6 500 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 ADGRF4Q8IZF3 695 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 GLG1Q92896 1179 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 TTC14Q96N46 770 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 CELF4Q9BZC1 486 aaKnown RBP7.78□□□□□ -1.16
LETMD1-236ENST00000553043 RTEL1Q9NZ71 1219 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 SPG21Q9NZD8 308 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 RAB23Q9ULC3 237 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 LHX6Q9UPM6 363 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 PCDHA1Q9Y5I3 950 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 CACNA1IQ9P0X4 2223 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 KIAA1671Q9BY89 1806 aa7.78□□□□□ -1.16
LETMD1-236ENST00000553043 MBLAC1A4D2B0 266 aaPredicted RBP7.77□□□□□ -1.17
LETMD1-236ENST00000553043 C9IYK1 514 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 NT5C1B-RDH14C9J2C7 533 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 LILRB5O75023 590 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 NCLP19338 710 aaKnown RBP7.77□□□□□ -1.17
LETMD1-236ENST00000553043 METAP2P50579 478 aaKnown RBP eCLIP7.77□□□□□ -1.17
LETMD1-236ENST00000553043 HSD17B4P51659 736 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 MFAP1P55081 439 aaKnown RBP7.77□□□□□ -1.17
LETMD1-236ENST00000553043 SNW1Q13573 536 aaKnown RBP7.77□□□□□ -1.17
LETMD1-236ENST00000553043 UBXN2BQ14CS0 331 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 GPATCH4Q5T3I0 446 aaKnown RBP7.77□□□□□ -1.17
LETMD1-236ENST00000553043 C20orf194Q5TEA3 1177 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 PRR23CQ6ZRP0 262 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 STOX1Q6ZVD7 989 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 FCHSD1Q86WN1 690 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 VPS52Q8N1B4 723 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 SLC39A11Q8N1S5 342 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 SLC22A17Q8WUG5 538 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 DDX1Q92499 740 aaKnown RBP7.77□□□□□ -1.17
LETMD1-236ENST00000553043 SHDQ96IW2 340 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 TMEM117Q9H0C3 514 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 SFXN1Q9H9B4 322 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 RGS18Q9NS28 235 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 C1orf112Q9NSG2 853 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 SEMA4GQ9NTN9 838 aa7.77□□□□□ -1.17
LETMD1-236ENST00000553043 MTF2Q9Y483 593 aaPredicted RBP7.77□□□□□ -1.17
LETMD1-236ENST00000553043 KANSL1LA0AUZ9 987 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 FAM170BA6NMN3 283 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 SPATA31C2B4DYI2 1134 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 OPLAHO14841 1288 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 RPS6KA5O75582 802 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 INSRRP14616 1297 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 TCF7P36402 384 aaPredicted RBP7.76□□□□□ -1.17
LETMD1-236ENST00000553043 STARD6P59095 220 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 KRT76Q01546 638 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 SEMA3FQ13275 785 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 GNPTABQ3T906 1256 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 CCDC178Q5BJE1 867 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 PRR23BQ6ZRT6 265 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 SMC5Q8IY18 1101 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 LRRC43Q8N309 656 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 CASD1Q96PB1 797 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 MYADMQ96S97 322 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 TMEM161AQ9NX61 479 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 NOC2LQ9Y3T9 749 aaKnown RBP7.76□□□□□ -1.17
LETMD1-236ENST00000553043 PCDHB15Q9Y5E8 787 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 MYH7BA7E2Y1 1941 aa7.76□□□□□ -1.17
LETMD1-236ENST00000553043 CNOT1A5YKK6 2376 aaKnown RBP7.75□□□□□ -1.17
LETMD1-236ENST00000553043 SRRM3A6NNA2 597 aaPredicted RBP7.75□□□□□ -1.17
LETMD1-236ENST00000553043 HIP1O00291 1037 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 RPLP2P05387 115 aaKnown RBP7.75□□□□□ -1.17
LETMD1-236ENST00000553043 RETP07949 1114 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 MYBP10242 640 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 CD72P21854 359 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 PDE1AP54750 535 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 GPC5P78333 572 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 TSHZ3Q63HK5 1081 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 LAIR1Q6GTX8 287 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 ABI1Q8IZP0 508 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 SAMD3Q8N6K7 520 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 KDF1Q8NAX2 398 aaPredicted RBP7.75□□□□□ -1.17
LETMD1-236ENST00000553043 RNF169Q8NCN4 708 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 TRAPPC12Q8WVT3 735 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 TMEM40Q8WWA1 233 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 STAMQ92783 540 aa7.75□□□□□ -1.17
LETMD1-236ENST00000553043 NELL1Q92832 810 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms