RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 TMEM62Q0P6H9 643 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 ARL6IP4Q66PJ3 421 aaKnown RBP11.09□□□□□ -0.63
LETMD1-234ENST00000552645 HAUS3Q68CZ6 603 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 MTHFD1LQ6UB35 978 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 ANO5Q75V66 913 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 CATSPER3Q86XQ3 398 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 TMEM199Q8N511 208 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 NEK9Q8TD19 979 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 PIGOQ8TEQ8 1089 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 DNAJB3Q8WWF6 145 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 SUGCTQ9HAC7 445 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 SYCE3A1L190 88 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 ZBTB42B2RXF5 422 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 BRD1O95696 1058 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 TPM3P06753 285 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 CKBP12277 381 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 CSF2RAP15509 400 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 NPEPPSP55786 919 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 ADAM17P78536 824 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 DNM1Q05193 864 aaKnown RBP11.09□□□□□ -0.63
LETMD1-234ENST00000552645 FPGSQ05932 587 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 PDIA5Q14554 519 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 XKR9Q5GH70 373 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 KRT79Q5XKE5 535 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 OTUD6AQ7L8S5 288 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 DEFB128Q7Z7B8 93 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 RSPH3Q86UC2 560 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 LRRC71Q8N4P6 559 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 IGSF22Q8N9C0 903 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 RASSF8Q8NHQ8 419 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 CAGE1Q8TC20 777 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 CHAMP1Q96JM3 812 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 CEP170P1Q96L14 293 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 PPP1R16BQ96T49 567 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 PLIN2Q99541 437 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 HSD17B14Q9BPX1 270 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 UBE2OQ9C0C9 1292 aaKnown RBP11.09□□□□□ -0.63
LETMD1-234ENST00000552645 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 GINS2Q9Y248 185 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 ZDHHC9Q9Y397 364 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
LETMD1-234ENST00000552645 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 STBD1O95210 358 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 C22orf31O95567 290 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 SPATA31C1P0DKV0 1188 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 ACRP10323 421 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 SELPP16109 830 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 CDK11BP21127 795 aaKnown RBP11.08□□□□□ -0.64
LETMD1-234ENST00000552645 RPA1P27694 616 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 CLCN3P51790 818 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 GRIN1Q05586 938 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 PTPAQ15257 358 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 ZNF618Q5T7W0 954 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 MFSD5Q6N075 450 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 EFCAB12Q6NXP0 572 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 TAF2Q6P1X5 1199 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 C4orf19Q8IY42 314 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
LETMD1-234ENST00000552645 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 NIFKQ9BYG3 293 aaKnown RBP11.08□□□□□ -0.64
LETMD1-234ENST00000552645 TUFT1Q9NNX1 390 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 CYP26B1Q9NR63 512 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 KIAA1024Q9UPX6 916 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 PCDHA2Q9Y5H9 948 aa11.08□□□□□ -0.64
LETMD1-234ENST00000552645 TET1Q8NFU7 2136 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 RSPH10B2B2RC85 870 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 M0QZ92 97 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 MAGEB2O15479 319 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
LETMD1-234ENST00000552645 IQCF3P0C7M6 154 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 RSPH10BP0C881 870 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
LETMD1-234ENST00000552645 POLGP54098 1239 aaPredicted RBP11.07□□□□□ -0.64
LETMD1-234ENST00000552645 SLC39A14Q15043 492 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 TRIM71Q2Q1W2 868 aaKnown RBP11.07□□□□□ -0.64
LETMD1-234ENST00000552645 TPRNQ4KMQ1 711 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 PRPF38BQ5VTL8 546 aaKnown RBP11.07□□□□□ -0.64
LETMD1-234ENST00000552645 SLC7A3Q8WY07 619 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 CLIC6Q96NY7 704 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 POLR3CQ9BUI4 534 aaPredicted RBP11.07□□□□□ -0.64
LETMD1-234ENST00000552645 CSRNP2Q9H175 543 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 DDX19AQ9NUU7 478 aaKnown RBP11.07□□□□□ -0.64
LETMD1-234ENST00000552645 AKT3Q9Y243 479 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 SIP14410 1827 aa11.07□□□□□ -0.64
LETMD1-234ENST00000552645 SPTLC2O15270 562 aa11.06□□□□□ -0.64
LETMD1-234ENST00000552645 VTNP04004 478 aa11.06□□□□□ -0.64
LETMD1-234ENST00000552645 TMOD1P28289 359 aa11.06□□□□□ -0.64
LETMD1-234ENST00000552645 LONP1P36776 959 aaKnown RBP11.06□□□□□ -0.64
LETMD1-234ENST00000552645 UBA7P41226 1012 aa11.06□□□□□ -0.64
LETMD1-234ENST00000552645 PPIGQ13427 754 aaKnown RBP eCLIP11.06□□□□□ -0.647e-6■□□□□ 9.9
LETMD1-234ENST00000552645 TARBP2Q15633 366 aaKnown RBP11.06□□□□□ -0.64
LETMD1-234ENST00000552645 ECM1Q16610 540 aa11.06□□□□□ -0.64
LETMD1-234ENST00000552645 CABP7Q86V35 215 aa11.06□□□□□ -0.64
LETMD1-234ENST00000552645 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
LETMD1-234ENST00000552645 LINC00301Q8NCQ3 95 aa11.06□□□□□ -0.64
LETMD1-234ENST00000552645 ZNF668Q96K58 619 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms