RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	BACH1	O14867	736 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	CCNE2	O96020	404 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	PPM1A	P35813	382 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	CRYBB1	P53674	252 aa	Predicted RBP	12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	MTMR3	Q13615	1198 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	DSC3	Q14574	896 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	KIZ	Q2M2Z5	673 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	TPRN	Q4KMQ1	711 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	CEP55	Q53EZ4	464 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	ZNF484	Q5JVG2	852 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	FAM160B1	Q5W0V3	765 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	WWC2	Q6AWC2	1192 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	ABHD15	Q6UXT9	468 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	RAB11FIP4	Q86YS3	637 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	UBALD2	Q8IYN6	164 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	CCDC82	Q8N4S0	544 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	CASP10	Q92851	521 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	MAP4K1	Q92918	833 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	PGBD1	Q96JS3	809 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	PPP1R16B	Q96T49	567 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	OSMR	Q99650	979 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	TSHZ2	Q9NRE2	1034 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	DMD	P11532	3685 aa		12.11	□□□□□ -0.47
PFKM-223	ENST00000551485	ZBTB42	B2RXF5	422 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	DDX39A	O00148	427 aa	Known RBP	12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	MEIS1	O00470	390 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	HOXA2	O43364	376 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	C22orf31	O95567	290 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	FOS	P01100	380 aa	Predicted RBP	12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	MCM5	P33992	734 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	LIFR	P42702	1097 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	FOXK2	Q01167	660 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	COL9A3	Q14050	684 aa	Predicted RBP	12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	PDXDC2P	Q6P474	469 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	KCNT2	Q6UVM3	1135 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	LRRC55	Q6ZSA7	311 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	ASCL5	Q7RTU5	278 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	TEX2	Q8IWB9	1127 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	LRRC43	Q8N309	656 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	EXOC6	Q8TAG9	804 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	ZNF558	Q96NG5	402 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	NECTIN4	Q96NY8	510 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	CASD1	Q96PB1	797 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	ANO3	Q9BYT9	981 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	POMK	Q9H5K3	350 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	RIC8A	Q9NPQ8	531 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	RNF19A	Q9NV58	838 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	CDH22	Q9UJ99	828 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	SORCS3	Q9UPU3	1222 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	SLC12A7	Q9Y666	1083 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	GVINP1	Q7Z2Y8	2422 aa		12.1	□□□□□ -0.47
PFKM-223	ENST00000551485	MYH9	P35579	1960 aa	Known RBP	12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	C2CD4D	B7Z1M9	353 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	GPR32	O75388	356 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	BRD1	O95696	1058 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	VTN	P04004	478 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	SREBF1	P36956	1147 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	PBX3	P40426	434 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	NAPA	P54920	295 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	KRT17	Q04695	432 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	ITIH3	Q06033	890 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	CES5A	Q6NT32	575 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	TYW1B	Q6NUM6	668 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	PPP1R18	Q6NYC8	613 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	MIS18BP1	Q6P0N0	1132 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	NIPA1	Q7RTP0	329 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	TMC7	Q7Z402	723 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	MICU3	Q86XE3	530 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	ABI1	Q8IZP0	508 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	TMEM105	Q8N8V8	129 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	FANCB	Q8NB91	859 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	ADAM7	Q9H2U9	754 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	ZNF302	Q9NR11	478 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	SPG21	Q9NZD8	308 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	HCFC2	Q9Y5Z7	792 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	CNTNAP5	Q8WYK1	1306 aa		12.09	□□□□□ -0.47
PFKM-223	ENST00000551485	DCHS1	Q96JQ0	3298 aa		12.08	□□□□□ -0.47
PFKM-223	ENST00000551485	PRR23A	A6NEV1	266 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	C2orf71	A6NGG8	1288 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	ATP4A	P20648	1035 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	NBL1	P41271	181 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	ADCY7	P51828	1080 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	AP3B2	Q13367	1082 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	SMC1A	Q14683	1233 aa	Known RBP	12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	SWSAP1	Q6NVH7	229 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	ECHDC2	Q86YB7	292 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	CKAP2L	Q8IYA6	745 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	METTL13	Q8N6R0	699 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	MRPL43	Q8N983	215 aa	Known RBP	12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	SMOC2	Q9H3U7	446 aa		12.08	□□□□□ -0.48
PFKM-223	ENST00000551485	DHX15	O43143	795 aa	Known RBP	12.07	□□□□□ -0.48
PFKM-223	ENST00000551485	CLASP2	O75122	1294 aa	Known RBP	12.07	□□□□□ -0.48
PFKM-223	ENST00000551485	ZNF76	P36508	570 aa		12.07	□□□□□ -0.48
PFKM-223	ENST00000551485	MTHFR	P42898	656 aa		12.07	□□□□□ -0.48
PFKM-223	ENST00000551485	CLK2	P49760	499 aa	Known RBP	12.07	□□□□□ -0.48
PFKM-223	ENST00000551485	CLLU1OS	Q5K130	101 aa		12.07	□□□□□ -0.48
PFKM-223	ENST00000551485	ASTL	Q6HA08	431 aa	Predicted RBP	12.07	□□□□□ -0.48
PFKM-223	ENST00000551485	SGMS1	Q86VZ5	419 aa		12.07	□□□□□ -0.48
PFKM-223	ENST00000551485	PLA2G4D	Q86XP0	818 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms