RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 OTOP2Q7RTS6 562 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 PIGOQ8TEQ8 1089 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 HERVK_113Q902F9 699 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 APBB2Q92870 758 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 CALML4Q96GE6 196 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 SCLT1Q96NL6 688 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 SH2D3AQ9BRG2 576 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 PCDH10Q9P2E7 1040 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 WRAP73Q9P2S5 460 aaPredicted RBP16.68■□□□□ 0.26
GPN3-206ENST00000549963 DBR1Q9UK59 544 aaKnown RBP16.68■□□□□ 0.26
GPN3-206ENST00000549963 KIAA1024Q9UPX6 916 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 KDM3AQ9Y4C1 1321 aa16.68■□□□□ 0.26
GPN3-206ENST00000549963 TMEM150BA6NC51 233 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 ZBBXA8MT70 800 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 ASAP2O43150 1006 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 NBNO60934 754 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 DGAT1O75907 488 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 BAIAP3O94812 1187 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 CLCN3P51790 818 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 CRYBB1P53674 252 aaPredicted RBP16.67■□□□□ 0.26
GPN3-206ENST00000549963 SLC39A14Q15043 492 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 C9orf50Q5SZB4 431 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 TRAF7Q6Q0C0 670 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 LRRC71Q8N4P6 559 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 RASSF8Q8NHQ8 419 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 SUCLA2Q9P2R7 463 aaPredicted RBP16.67■□□□□ 0.26
GPN3-206ENST00000549963 GINS2Q9Y248 185 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 SLC4A7Q9Y6M7 1214 aa16.67■□□□□ 0.26
GPN3-206ENST00000549963 LOXHD1Q8IVV2 1947 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 IGKV6-21A0A0C4DH24 114 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 ABHD14A-ACY1A0A1B0GW23 586 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 ARHGEF35A5YM69 484 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 ZBTB39O15060 712 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 VTNP04004 478 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 MARCKSP29966 332 aaPredicted RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 TXLNAP40222 546 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 KCNJ6P48051 423 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 RARRES1P49788 294 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 NLRP11P59045 1033 aaKnown RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 NUCB2P80303 420 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 MGAT3Q09327 533 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 PTPAQ15257 358 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 ZRSR1Q15695 479 aaKnown RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 PLEKHG4Q58EX7 1191 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 HABP4Q5JVS0 413 aaKnown RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 USP28Q96RU2 1077 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 MTRQ99707 1265 aa16.66■□□□□ 0.26
GPN3-206ENST00000549963 IFIH1Q9BYX4 1025 aaKnown RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 DDX19AQ9NUU7 478 aaKnown RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 TFIP11Q9UBB9 837 aaKnown RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 SRPRBQ9Y5M8 271 aaKnown RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 MORC2Q9Y6X9 1032 aaPredicted RBP16.66■□□□□ 0.26
GPN3-206ENST00000549963 CDC25AP30304 524 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
GPN3-206ENST00000549963 MXD4Q14582 209 aaPredicted RBP16.65■□□□□ 0.26
GPN3-206ENST00000549963 MBTPS1Q14703 1052 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 EMC2Q15006 297 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 KIZQ2M2Z5 673 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 FOXD4L6Q3SYB3 417 aaPredicted RBP16.65■□□□□ 0.26
GPN3-206ENST00000549963 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 FOXD4L3Q6VB84 417 aaPredicted RBP16.65■□□□□ 0.26
GPN3-206ENST00000549963 TSHZ1Q6ZSZ6 1077 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 CABP7Q86V35 215 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 KRI1Q8N9T8 703 aaKnown RBP16.65■□□□□ 0.26
GPN3-206ENST00000549963 DBF4BQ8NFT6 615 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 TET1Q8NFU7 2136 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 NLRP7Q8WX94 980 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 PSPC1Q8WXF1 523 aaKnown RBP16.65■□□□□ 0.26
GPN3-206ENST00000549963 CEP89Q96ST8 783 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 INO80BQ9C086 356 aaPredicted RBP16.65■□□□□ 0.26
GPN3-206ENST00000549963 ATP6V0A4Q9HBG4 840 aa16.65■□□□□ 0.26
GPN3-206ENST00000549963 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.64■□□□□ 0.25
GPN3-206ENST00000549963 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.64■□□□□ 0.25
GPN3-206ENST00000549963 PP2D1A8MPX8 630 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 GPR182O15218 404 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 SPTLC2O15270 562 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 RPS6KA5O75582 802 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 YEATS4O95619 227 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 BRD1O95696 1058 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 GHRP10912 638 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 PAK2Q13177 524 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 PKP1Q13835 747 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 LPIN1Q14693 890 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 GPNMBQ14956 572 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 LRIT3Q3SXY7 679 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 ZNF410Q86VK4 478 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 RHPN2Q8IUC4 686 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 LINC01465Q8N7H1 131 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
GPN3-206ENST00000549963 MCPH1Q8NEM0 835 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 FTHL17Q9BXU8 183 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 GCOM2Q9BZD3 368 aaPredicted RBP16.64■□□□□ 0.25
GPN3-206ENST00000549963 CCDC39Q9UFE4 941 aa16.64■□□□□ 0.25
GPN3-206ENST00000549963 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 A0A087WWV3 80 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 PPP6R2O75170 966 aa16.63■□□□□ 0.25
GPN3-206ENST00000549963 GPR32O75388 356 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms