RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 NIFKQ9BYG3 293 aaKnown RBP11□□□□□ -0.65
HDAC7-229ENST00000549883 BACH2Q9BYV9 841 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 ADAMTS10Q9H324 1103 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 SUGCTQ9HAC7 445 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 ERVK-5Q9HDB9 667 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 NRBP2Q9NSY0 501 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 BMP2KQ9NSY1 1161 aaPredicted RBP11□□□□□ -0.65
HDAC7-229ENST00000549883 KDM3AQ9Y4C1 1321 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 REV3LO60673 3130 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 M0QZ92 97 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 TBX3O15119 743 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 ST18O60284 1047 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 MARCH6O60337 910 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 LPXNO60711 386 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 CSDE1O75534 798 aaKnown RBP10.99□□□□□ -0.65
HDAC7-229ENST00000549883 IBSPP21815 317 aaPredicted RBP10.99□□□□□ -0.65
HDAC7-229ENST00000549883 FGFR4P22455 802 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 TXKP42681 527 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 TOB1P50616 345 aaPredicted RBP10.99□□□□□ -0.65
HDAC7-229ENST00000549883 NLRP11P59045 1033 aaKnown RBP10.99□□□□□ -0.65
HDAC7-229ENST00000549883 PSMC5P62195 406 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 NFX1Q12986 1120 aaKnown RBP10.99□□□□□ -0.65
HDAC7-229ENST00000549883 ZNF174Q15697 407 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 CALCRLQ16602 461 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 XKR3Q5GH77 459 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 FAM228AQ86W67 206 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 CRIPAKQ8N1N5 446 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 NME8Q8N427 588 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
HDAC7-229ENST00000549883 GDPD5Q8WTR4 605 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 APBB2Q92870 758 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 MTMR9Q96QG7 549 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 ST3GAL5Q9UNP4 418 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 AKT3Q9Y243 479 aa10.99□□□□□ -0.65
HDAC7-229ENST00000549883 FNDC1Q4ZHG4 1894 aaPredicted RBP10.99□□□□□ -0.65
HDAC7-229ENST00000549883 POTEMA6NI47 508 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 MAGEB2O15479 319 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 NEMFO60524 1076 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 LINC00271P0C7V0 271 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 QARSP47897 775 aaKnown RBP10.98□□□□□ -0.65
HDAC7-229ENST00000549883 HMGN5P82970 282 aaKnown RBP10.98□□□□□ -0.65
HDAC7-229ENST00000549883 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 PAK2Q13177 524 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 GRB10Q13322 594 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 EPHA7Q15375 998 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 KSR1Q8IVT5 923 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 SLC17A8Q8NDX2 589 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 GAS2L1Q99501 681 aaPredicted RBP10.98□□□□□ -0.65
HDAC7-229ENST00000549883 LXNQ9BS40 222 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 FOXP1Q9H334 677 aaPredicted RBP10.98□□□□□ -0.65
HDAC7-229ENST00000549883 TTC12Q9H892 705 aaPredicted RBP10.98□□□□□ -0.65
HDAC7-229ENST00000549883 UPF2Q9HAU5 1272 aaKnown RBP10.98□□□□□ -0.65
HDAC7-229ENST00000549883 CEP131Q9UPN4 1083 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 SQORQ9Y6N5 450 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 RALGAPA2Q2PPJ7 1873 aa10.98□□□□□ -0.65
HDAC7-229ENST00000549883 IGKV6-21A0A0C4DH24 114 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 SLITRK3O94933 977 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 BAG4O95429 457 aaKnown RBP10.97□□□□□ -0.65
HDAC7-229ENST00000549883 P4HBP07237 508 aaKnown RBP10.97□□□□□ -0.65
HDAC7-229ENST00000549883 GJB2P29033 226 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 GPC3P51654 580 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 CRYBB1P53674 252 aaPredicted RBP10.97□□□□□ -0.65
HDAC7-229ENST00000549883 ERVK-21P61565 698 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 SAFBQ15424 915 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDAC7-229ENST00000549883 NOSTRINQ8IVI9 506 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 TPH2Q8IWU9 490 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 SLFN12Q8IYM2 578 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 MICALL1Q8N3F8 863 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 C4orf32Q8N8J7 132 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 YME1L1Q96TA2 773 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 NAP1L4Q99733 375 aaKnown RBP10.97□□□□□ -0.65
HDAC7-229ENST00000549883 ADAM2Q99965 735 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 EIF2AK1Q9BQI3 630 aaKnown RBP10.97□□□□□ -0.65
HDAC7-229ENST00000549883 TSPYL2Q9H2G4 693 aaPredicted RBP10.97□□□□□ -0.65
HDAC7-229ENST00000549883 RC3H2Q9HBD1 1191 aaKnown RBP10.97□□□□□ -0.65
HDAC7-229ENST00000549883 CYP26B1Q9NR63 512 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 PCDHA12Q9UN75 941 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 INSL6Q9Y581 213 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 MTCH2Q9Y6C9 303 aa10.97□□□□□ -0.65
HDAC7-229ENST00000549883 MAFO75444 373 aaPredicted RBP10.96□□□□□ -0.65
HDAC7-229ENST00000549883 DGKIO75912 1065 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 SPATA31C1P0DKV0 1188 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 U2AF2P26368 475 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC7-229ENST00000549883 YWHABP31946 246 aaKnown RBP10.96□□□□□ -0.65
HDAC7-229ENST00000549883 DSC3Q14574 896 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 TTC38Q5R3I4 469 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 C4orf19Q8IY42 314 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 TMEM143Q96AN5 459 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 CEP170P1Q96L14 293 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 TGS1Q96RS0 853 aaKnown RBP10.96□□□□□ -0.65
HDAC7-229ENST00000549883 MAP7D2Q96T17 732 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 HSD17B14Q9BPX1 270 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 SUCLA2Q9P2R7 463 aaPredicted RBP10.96□□□□□ -0.65
HDAC7-229ENST00000549883 PCDHB6Q9Y5E3 794 aa10.96□□□□□ -0.65
HDAC7-229ENST00000549883 UNC80Q8N2C7 3258 aa10.96□□□□□ -0.66
HDAC7-229ENST00000549883 BRWD1Q9NSI6 2320 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 A0A087WZ62 844 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms