RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 DPCR1Q3MIW9 517 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 ANO6Q4KMQ2 910 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 GNASQ5JWF2 1037 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 FAM26FQ5R3K3 315 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 TRMT1LQ7Z2T5 733 aaKnown RBP19.27■□□□□ 0.68
LETMD1-220ENST00000549686 PCSK9Q8NBP7 692 aaKnown RBP19.27■□□□□ 0.68
LETMD1-220ENST00000549686 BPIFA3Q9BQP9 254 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 OLFML3Q9NRN5 406 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 RRN3P2A6NIE6 340 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 MAGEB2O15479 319 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 HIP1RO75146 1068 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 MYL3P08590 195 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 MAPTP10636 758 aaKnown RBP19.26■□□□□ 0.67
LETMD1-220ENST00000549686 BMP6P22004 513 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 SCP2P22307 547 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 ERCC5P28715 1186 aaPredicted RBP19.26■□□□□ 0.67
LETMD1-220ENST00000549686 RAD51AP2Q09MP3 1159 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 TBC1D8BQ0IIM8 1120 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 EMC2Q15006 297 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 SLC9C1Q4G0N8 1177 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 STXBP4Q6ZWJ1 553 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 RNF180Q86T96 592 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 KLHDC9Q8NEP7 349 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 FAM200AQ8TCP9 573 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 TCP11Q8WWU5 503 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 CEP89Q96ST8 783 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 MTG1Q9BT17 334 aaPredicted RBP19.26■□□□□ 0.67
LETMD1-220ENST00000549686 DNAJC25Q9H1X3 360 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 ZHX3Q9H4I2 956 aa19.26■□□□□ 0.67
LETMD1-220ENST00000549686 HAS3O00219 553 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 PLS3P13797 630 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 ABCD1P33897 745 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 ZNF165P49910 485 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 PURAQ00577 322 aaKnown RBP19.25■□□□□ 0.67
LETMD1-220ENST00000549686 MAPK7Q13164 816 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 ALCAMQ13740 583 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 GSE1Q14687 1217 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 MFSD10Q14728 455 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 FAM102BQ5T8I3 360 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 ISM2Q6H9L7 571 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 MYCT1Q8N699 235 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 RETREG2Q8NC44 543 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 RNPEPQ9H4A4 650 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 NRCAMQ92823 1304 aa19.25■□□□□ 0.67
LETMD1-220ENST00000549686 ZBTB42B2RXF5 422 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 CABYRO75952 493 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 PGK1P00558 417 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 HSPA1AP0DMV8 641 aaKnown RBP19.24■□□□□ 0.67
LETMD1-220ENST00000549686 HSPA1BP0DMV9 641 aaKnown RBP19.24■□□□□ 0.67
LETMD1-220ENST00000549686 INSRRP14616 1297 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 PSEN2P49810 448 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 BEX3Q00994 111 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 CACNB1Q02641 598 aaPredicted RBP19.24■□□□□ 0.67
LETMD1-220ENST00000549686 PPFIA1Q13136 1202 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 KIAA0753Q2KHM9 967 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 FBXO46Q6PJ61 603 aaPredicted RBP19.24■□□□□ 0.67
LETMD1-220ENST00000549686 SFR1Q86XK3 245 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 DAW1Q8N136 415 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 KAT2BQ92831 832 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 SH2D3AQ9BRG2 576 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 TSEN34Q9BSV6 310 aaKnown RBP19.24■□□□□ 0.67
LETMD1-220ENST00000549686 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.24■□□□□ 0.67
LETMD1-220ENST00000549686 XPNPEP1Q9NQW7 623 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 PCDHA2Q9Y5H9 948 aa19.24■□□□□ 0.67
LETMD1-220ENST00000549686 MYH9P35579 1960 aaKnown RBP19.23■□□□□ 0.67
LETMD1-220ENST00000549686 IGKV6-21A0A0C4DH24 114 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 RSPH10B2B2RC85 870 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 H0YCG3 227 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 PSMA7O14818 248 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 RSPH10BP0C881 870 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 GNAT1P11488 350 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 SMTNP53814 917 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 STK4Q13043 487 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 DMP1Q13316 513 aaPredicted RBP19.23■□□□□ 0.67
LETMD1-220ENST00000549686 PPP2R5AQ15172 486 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 ODR4Q5SWX8 454 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 IER5Q5VY09 327 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 FAM178BQ8IXR5 827 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 ADSSL1Q8N142 457 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 GUF1Q8N442 669 aaKnown RBP19.23■□□□□ 0.67
LETMD1-220ENST00000549686 ARRDC4Q8NCT1 418 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 KIAA0895Q8NCT3 520 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 SH3TC2Q8TF17 1288 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 SPIRE2Q8WWL2 714 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 DHTKD1Q96HY7 919 aaPredicted RBP19.23■□□□□ 0.67
LETMD1-220ENST00000549686 IFT74Q96LB3 600 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 MRPL44Q9H9J2 332 aaKnown RBP19.23■□□□□ 0.67
LETMD1-220ENST00000549686 GDAQ9Y2T3 454 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 UBE4BO95155 1302 aa19.23■□□□□ 0.67
LETMD1-220ENST00000549686 MYADML2A6NDP7 307 aa19.22■□□□□ 0.67
LETMD1-220ENST00000549686 GOLGA6L3A6NEY3 463 aa19.22■□□□□ 0.67
LETMD1-220ENST00000549686 SMTNL1A8MU46 457 aa19.22■□□□□ 0.67
LETMD1-220ENST00000549686 PPP1R3GB7ZBB8 358 aa19.22■□□□□ 0.67
LETMD1-220ENST00000549686 EIF3DO15371 548 aaKnown RBP eCLIP19.22■□□□□ 0.67
LETMD1-220ENST00000549686 TMOD1P28289 359 aa19.22■□□□□ 0.67
LETMD1-220ENST00000549686 DNM2P50570 870 aa19.22■□□□□ 0.67
LETMD1-220ENST00000549686 GRIK4Q16099 956 aa19.22■□□□□ 0.67
LETMD1-220ENST00000549686 FOXR2Q6PJQ5 311 aa19.22■□□□□ 0.67
LETMD1-220ENST00000549686 C11orf57Q6ZUT1 292 aaPredicted RBP19.22■□□□□ 0.67
LETMD1-220ENST00000549686 GAS2L3Q86XJ1 694 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms