RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 COL4A6Q14031 1691 aa22.25■■□□□ 1.15
TUBA1C-205ENST00000549554 NLRC5Q86WI3 1866 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 LCHNA4D1U4 455 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 GPR182O15218 404 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 STBD1O95210 358 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 HTRA4P83105 476 aaPredicted RBP22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 NFX1Q12986 1120 aaKnown RBP22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 TTC38Q5R3I4 469 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 OTUD6AQ7L8S5 288 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 C4orf19Q8IY42 314 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 SCLT1Q96NL6 688 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 MTMR9Q96QG7 549 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 PPP1R16BQ96T49 567 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 OSMRQ99650 979 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 ZSWIM4Q9H7M6 989 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 SMC3Q9UQE7 1217 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 RALGAPA2Q2PPJ7 1873 aa22.24■■□□□ 1.15
TUBA1C-205ENST00000549554 COL4A4P53420 1690 aaPredicted RBP22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 CHD9Q3L8U1 2897 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 WNT7AO00755 349 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 ENPP3O14638 875 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 U2AF2P26368 475 aaKnown RBP eCLIP22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 GJB2P29033 226 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 NLRP11P59045 1033 aaKnown RBP22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 CDC42EP1Q00587 391 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 ANO5Q75V66 913 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 ARNTL2Q8WYA1 636 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 DYDC2Q96IM9 177 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 ERVK-5Q9HDB9 667 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 CYP26B1Q9NR63 512 aa22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 RNF216Q9NWF9 866 aaPredicted RBP22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 NOC2LQ9Y3T9 749 aaKnown RBP22.23■■□□□ 1.15
TUBA1C-205ENST00000549554 TMEM150BA6NC51 233 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 H3BQV1 296 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 GPR32O75388 356 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 IGFBP4P22692 258 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 CYP4A11Q02928 519 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 TMEM266Q2M3C6 531 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 PLA2G4FQ68DD2 849 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 SLC7A3Q8WY07 619 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 CEP170P1Q96L14 293 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 TGS1Q96RS0 853 aaKnown RBP22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 EIF2AK1Q9BQI3 630 aaKnown RBP22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 CERS4Q9HA82 394 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 CDHR5Q9HBB8 845 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 RGL1Q9NZL6 768 aa22.22■■□□□ 1.15
TUBA1C-205ENST00000549554 LINC01553A4QN01 128 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 RBAK-RBAKDNI3L0D1 243 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 MAFO75444 373 aaPredicted RBP22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 ARHGEF15O94989 841 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 OR52Z1P0C646 297 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 STAG3L1P0CL83 205 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 YWHABP31946 246 aaKnown RBP22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 RFC5P40937 340 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 CTTNQ14247 550 aaKnown RBP22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 ZNF174Q15697 407 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 MCTP1Q6DN14 999 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 TPH2Q8IWU9 490 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 SP7Q8TDD2 431 aaPredicted RBP22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 TMEM40Q8WWA1 233 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 SAMD11Q96NU1 681 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 CEP89Q96ST8 783 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 TSPYL2Q9H2G4 693 aaPredicted RBP22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 TMEM60Q9H2L4 133 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 ST3GAL5Q9UNP4 418 aa22.21■■□□□ 1.15
TUBA1C-205ENST00000549554 IGKV6-21A0A0C4DH24 114 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 DENND3A2RUS2 1198 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 GTPBP6O43824 516 aaPredicted RBP22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 GPC3P51654 580 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 POLGP54098 1239 aaPredicted RBP22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 ERVK-21P61565 698 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 NPAS4Q8IUM7 802 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 NLRP7Q8WX94 980 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 LINC01599Q8WXQ3 324 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 CCDC43Q96MW1 224 aaKnown RBP22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 SH2D3AQ9BRG2 576 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 C1orf112Q9NSG2 853 aa22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 WRAP73Q9P2S5 460 aaPredicted RBP22.2■■□□□ 1.14
TUBA1C-205ENST00000549554 GAS2O43903 313 aaKnown RBP22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 SLITRK3O94933 977 aa22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 EIF4BP23588 611 aaKnown RBP22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 NPEPPSP55786 919 aa22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 XKR9Q5GH70 373 aa22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 FAM228AQ86W67 206 aa22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 ERMNQ8TAM6 284 aa22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 ADAMTS10Q9H324 1103 aa22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 SUCLA2Q9P2R7 463 aaPredicted RBP22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 LRFN2Q9ULH4 789 aa22.19■■□□□ 1.14
TUBA1C-205ENST00000549554 COL6A3P12111 3177 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 ADGRA3Q8IWK6 1321 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 POTEMA6NI47 508 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 LYPLA2O95372 231 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 ADGRE1Q14246 886 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 ZNF410Q86VK4 478 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 SLC17A8Q8NDX2 589 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 TCP11Q8WWU5 503 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 HSD17B14Q9BPX1 270 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 GCOM2Q9BZD3 368 aaPredicted RBP22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 TMX1Q9H3N1 280 aa22.18■■□□□ 1.14
TUBA1C-205ENST00000549554 CDH23Q9H251 3354 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms