RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 MAP7D2Q96T17 732 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 NIFKQ9BYG3 293 aaKnown RBP21■□□□□ 0.95
CHMP1A-207ENST00000549328 KCNMB3Q9NPA1 279 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 TBX3O15119 743 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 SLC37A4O43826 429 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 VTNP04004 478 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 LINC00271P0C7V0 271 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 BMPR1AP36894 532 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 CLCN3P51790 818 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 BTG3Q14201 252 aaPredicted RBP20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 PIK3AP1Q6ZUJ8 805 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 NSUN7Q8NE18 718 aaKnown RBP20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 IL27Q8NEV9 243 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 BRMS1Q9HCU9 246 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 ST3GAL5Q9UNP4 418 aa20.99■□□□□ 0.95
CHMP1A-207ENST00000549328 DTNBO60941 627 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 TFF2Q03403 129 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 TBC1D8BQ0IIM8 1120 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 PPP2R5CQ13362 524 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 CMTR2Q8IYT2 770 aaKnown RBP20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 OSMRQ99650 979 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 RGS18Q9NS28 235 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 C1orf112Q9NSG2 853 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 AKT3Q9Y243 479 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 RALGAPA2Q2PPJ7 1873 aa20.98■□□□□ 0.95
CHMP1A-207ENST00000549328 CCNT1O60563 726 aaKnown RBP20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 STBD1O95210 358 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 BMP1P13497 986 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 KRT2P35908 639 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 SARSP49591 514 aaKnown RBP20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 NLRP11P59045 1033 aaKnown RBP20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 PSMC5P62195 406 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 CDC42EP1Q00587 391 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 SLC24A5Q71RS6 500 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 FAM228AQ86W67 206 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 LRRC71Q8N4P6 559 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 ADAM2Q99965 735 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 C11orf84Q9BUA3 381 aaPredicted RBP20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 PLVAPQ9BX97 442 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 ADAMTS10Q9H324 1103 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 LRFN2Q9ULH4 789 aa20.97■□□□□ 0.95
CHMP1A-207ENST00000549328 NLRC5Q86WI3 1866 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 XIRP2A4UGR9 3374 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 DENND3A2RUS2 1198 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 MGEA5O60502 916 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 DKC1O60832 514 aaKnown RBP eCLIP20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 EIF4BP23588 611 aaKnown RBP20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 CTNNB1P35222 781 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 TIGD5Q53EQ6 642 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 EARS2Q5JPH6 523 aaKnown RBP20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 ADAMTS19Q8TE59 1207 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 TNFRSF25Q93038 417 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 CEP89Q96ST8 783 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 PPP1R16BQ96T49 567 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 LMAN2LQ9H0V9 348 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 SEPT9Q9UHD8 586 aaPredicted RBP20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 VAV3Q9UKW4 847 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 PCDHB7Q9Y5E2 793 aa20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 SPTBN5Q9NRC6 3674 aaKnown RBP20.96■□□□□ 0.95
CHMP1A-207ENST00000549328 NCOR1O75376 2440 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 IGKV6-21A0A0C4DH24 114 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 C9IYK1 514 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 EML1O00423 815 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 MMP1P03956 469 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 FAM189BP81408 668 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 NR5A1Q13285 461 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 HAS1Q92839 578 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 LIMCH1Q9UPQ0 1083 aa20.95■□□□□ 0.94
CHMP1A-207ENST00000549328 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 DDX11L8A8MPP1 907 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 MARCH6O60337 910 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 BAG4O95429 457 aaKnown RBP20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 P4HBP07237 508 aaKnown RBP20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 QARSP47897 775 aaKnown RBP20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 DNM2P50570 870 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 GPC3P51654 580 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 TRIM29Q14134 588 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 DSC3Q14574 896 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 MTERF2Q49AM1 385 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 NAALADL2Q58DX5 795 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 SLFN12Q8IYM2 578 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 BANK1Q8NDB2 785 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 P2RX5Q93086 422 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 BRWD1Q9NSI6 2320 aa20.94■□□□□ 0.94
CHMP1A-207ENST00000549328 TNFRSF10AO00220 468 aa20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 JAK2O60674 1132 aa20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 MAFO75444 373 aaPredicted RBP20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 DARSP14868 501 aaKnown RBP20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 KCNQ1P51787 676 aa20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 EPHA7Q15375 998 aa20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 ANO5Q75V66 913 aa20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 UHRF1Q96T88 793 aaPredicted RBP20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 JPH2Q9BR39 696 aaPredicted RBP20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 ELAC1Q9H777 363 aaKnown RBP20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 TMEM161AQ9NX61 479 aa20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 MRPL42Q9Y6G3 142 aaKnown RBP20.93■□□□□ 0.94
CHMP1A-207ENST00000549328 FAM205CA6NFA0 338 aa20.92■□□□□ 0.94
CHMP1A-207ENST00000549328 BTBD18B2RXH4 712 aa20.92■□□□□ 0.94
CHMP1A-207ENST00000549328 ST3GAL1Q11201 340 aa20.92■□□□□ 0.94
CHMP1A-207ENST00000549328 POTEDQ86YR6 584 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms