RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 PLEKHH1Q9ULM0 1364 aa6.69□□□□□ -1.34
UBE2N-202ENST00000548946 TRPM1Q7Z4N2 1603 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 C9orf84Q5VXU9 1444 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 ABCC10Q5T3U5 1492 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 CCDC66A2RUB6 948 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 MAN2B1O00754 1011 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 GPR42O15529 346 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 CUTAO60888 179 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 AMY2AP04746 511 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 AMY2BP19961 511 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 CSF2RBP32927 897 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 DNM2P50570 870 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 JAM2P57087 298 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 ICAM4Q14773 271 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 MKL1Q969V6 931 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 SRPK1Q96SB4 655 aaKnown RBP6.68□□□□□ -1.34
UBE2N-202ENST00000548946 CDK5RAP1Q96SZ6 601 aaKnown RBP6.68□□□□□ -1.34
UBE2N-202ENST00000548946 DEF6Q9H4E7 631 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 PANK3Q9H999 370 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 NDOR1Q9UHB4 597 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 SLC4A7Q9Y6M7 1214 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 EIF4G3O43432 1585 aaKnown RBP6.68□□□□□ -1.34
UBE2N-202ENST00000548946 DISP3Q9P2K9 1392 aa6.68□□□□□ -1.34
UBE2N-202ENST00000548946 ERBINQ96RT1 1412 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 PLA2R1Q13018 1463 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 PRDM15P57071 1507 aaPredicted RBP6.67□□□□□ -1.34
UBE2N-202ENST00000548946 CLASP1Q7Z460 1538 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 CCDC163A0A0D9SF12 145 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.67□□□□□ -1.34
UBE2N-202ENST00000548946 FAM221BA6H8Z2 402 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 CLASP2O75122 1294 aaKnown RBP6.67□□□□□ -1.34
UBE2N-202ENST00000548946 POLD1P28340 1107 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 HERVK_113P62684 666 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 LACTBP83111 547 aaPredicted RBP6.67□□□□□ -1.34
UBE2N-202ENST00000548946 SLFN5Q08AF3 891 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 USP10Q14694 798 aaKnown RBP6.67□□□□□ -1.34
UBE2N-202ENST00000548946 SF3A1Q15459 793 aaKnown RBP6.67□□□□□ -1.34
UBE2N-202ENST00000548946 MAGEB10Q96LZ2 347 aaPredicted RBP6.67□□□□□ -1.34
UBE2N-202ENST00000548946 PTPN18Q99952 460 aa6.67□□□□□ -1.34
UBE2N-202ENST00000548946 EIF3AQ14152 1382 aaKnown RBP6.67□□□□□ -1.34
UBE2N-202ENST00000548946 ESYT3A0FGR9 886 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 PRAMEF25A6NGN4 478 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 ZNF561-AS1K7EIQ3 104 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 CNOT4O95628 575 aaKnown RBP6.66□□□□□ -1.34
UBE2N-202ENST00000548946 PTGS1P23219 599 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 PPP2R1AP30153 589 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 CC2D1BQ5T0F9 858 aaKnown RBP6.66□□□□□ -1.34
UBE2N-202ENST00000548946 GPR155Q7Z3F1 870 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 ZSWIM2Q8NEG5 633 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 DNERQ8NFT8 737 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 LMF1Q96S06 567 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 DNAJC7Q99615 494 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 KLC2Q9H0B6 622 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 TMPRSS5Q9H3S3 457 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 SLC52A2Q9HAB3 445 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 GALNT8Q9NY28 637 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 TSC22D4Q9Y3Q8 395 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 TCAF1Q9Y4C2 921 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 CDC42BPAQ5VT25 1732 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 A2MP01023 1474 aa6.66□□□□□ -1.34
UBE2N-202ENST00000548946 ARHGEF5Q12774 1597 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.65□□□□□ -1.34
UBE2N-202ENST00000548946 WDR72Q3MJ13 1102 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 CXXC5Q7LFL8 322 aaKnown RBP6.65□□□□□ -1.34
UBE2N-202ENST00000548946 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.65□□□□□ -1.34
UBE2N-202ENST00000548946 WDR48Q8TAF3 677 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 MEGF9Q9H1U4 602 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 SEMA4AQ9H3S1 761 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 SMURF1Q9HCE7 757 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 CD248Q9HCU0 757 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 INCENPQ9NQS7 918 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 FBXO10Q9UK96 956 aa6.65□□□□□ -1.34
UBE2N-202ENST00000548946 NUP160Q12769 1436 aa6.65□□□□□ -1.35
UBE2N-202ENST00000548946 SYNJ2O15056 1496 aa6.65□□□□□ -1.35
UBE2N-202ENST00000548946 PATE3B3GLJ2 98 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 MATN3O15232 486 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 ZNF623O75123 536 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 C4BPAP04003 597 aaKnown RBP6.64□□□□□ -1.35
UBE2N-202ENST00000548946 TNFRSF1AP19438 455 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 AOAHP28039 575 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 TOP3AQ13472 1001 aaPredicted RBP6.64□□□□□ -1.35
UBE2N-202ENST00000548946 TRIM61Q5EBN2 209 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 GSTCDQ8NEC7 633 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 THAP3Q8WTV1 239 aaPredicted RBP6.64□□□□□ -1.35
UBE2N-202ENST00000548946 RRAGDQ9NQL2 400 aaPredicted RBP6.64□□□□□ -1.35
UBE2N-202ENST00000548946 SFMBT1Q9UHJ3 866 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 PLB1Q6P1J6 1458 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 MAGI2Q86UL8 1455 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 WDR7Q9Y4E6 1490 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 FAM135AQ9P2D6 1515 aa6.64□□□□□ -1.35
UBE2N-202ENST00000548946 KCNK3O14649 394 aa6.63□□□□□ -1.35
UBE2N-202ENST00000548946 PIK3C2GO75747 1445 aa6.63□□□□□ -1.35
UBE2N-202ENST00000548946 IGHDP01880 384 aa6.63□□□□□ -1.35
UBE2N-202ENST00000548946 ZNF888P0CJ79 500 aaPredicted RBP6.63□□□□□ -1.35
UBE2N-202ENST00000548946 TSPY4P0CV99 314 aa6.63□□□□□ -1.35
UBE2N-202ENST00000548946 TSPY10P0CW01 314 aa6.63□□□□□ -1.35
UBE2N-202ENST00000548946 TMF1P82094 1093 aa6.63□□□□□ -1.35
UBE2N-202ENST00000548946 GRIN2AQ12879 1464 aa6.63□□□□□ -1.35
UBE2N-202ENST00000548946 HS1BP3Q53T59 392 aa6.63□□□□□ -1.35
UBE2N-202ENST00000548946 ZMAT1Q5H9K5 638 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms