RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ZNF274Q96GC6 653 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 AIFM3Q96NN9 605 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 ADAM2Q99965 735 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 LARP6Q9BRS8 491 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 UNC45AQ9H3U1 944 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 DISC1Q9NRI5 854 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 RGS18Q9NS28 235 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 C1orf112Q9NSG2 853 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 LRFN2Q9ULH4 789 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 DENND3A2RUS2 1198 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 CPLX1O14810 134 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 GPR182O15218 404 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 MAGEB2O15479 319 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 CHMP2AO43633 222 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 TDP2O95551 362 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 IBSPP21815 317 aaPredicted RBP19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 JAK3P52333 1124 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 Q4G0T1 1027 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 NAALADL2Q58DX5 795 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 ODR4Q5SWX8 454 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 LRCH2Q5VUJ6 765 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 EP400NLQ6ZTU2 488 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 KLHL23Q8NBE8 558 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 TEKT3Q9BXF9 490 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 C22orf23Q9BZE7 217 aa19.65■□□□□ 0.74
CHMP1A-205ENST00000548650 NCK2O43639 380 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 TBX10O75333 385 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 SFNP31947 248 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 GTF2F1P35269 517 aaKnown RBP eCLIP19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 STK3Q13188 491 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 DSC3Q14574 896 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 B3GNT9Q6UX72 402 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 SLC24A5Q71RS6 500 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 BLIDQ8IZY5 108 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 FAM177A1Q8N128 213 aaPredicted RBP19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 GJD3Q8N144 294 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 LRRC71Q8N4P6 559 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 SPPL3Q8TCT6 385 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 MAP7D2Q96T17 732 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 C11orf16Q9NQ32 467 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 PCDHB7Q9Y5E2 793 aa19.64■□□□□ 0.73
CHMP1A-205ENST00000548650 CYP3A7-CYP3A51PA0A087WV96 503 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 PSMD10O75832 226 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 CYP3A7P24462 503 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 IRS1P35568 1242 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 DLX2Q07687 328 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 EFCAB12Q6NXP0 572 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 MBOAT7Q96N66 472 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 ADAMTS10Q9H324 1103 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 HCSTQ9UBK5 93 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 AKT3Q9Y243 479 aa19.63■□□□□ 0.73
CHMP1A-205ENST00000548650 TBKBP1A7MCY6 615 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 LINC01565O15544 149 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 NLRP11P59045 1033 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 FAM102BQ5T8I3 360 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 MOXD1Q6UVY6 613 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 ADGRD2Q7Z7M1 963 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 RDM1Q8NG50 284 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 ETNPPLQ8TBG4 499 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 POF1BQ8WVV4 589 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 LRFN3Q9BTN0 628 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 PDRG1Q9NUG6 133 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 TMEM161AQ9NX61 479 aa19.62■□□□□ 0.73
CHMP1A-205ENST00000548650 ARID2Q68CP9 1835 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 PI4K2BG5E9Z4 385 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 FGFR1P11362 822 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 TMOD1P28289 359 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 SSTR3P32745 418 aaPredicted RBP19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 FAM189BP81408 668 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 ZP2Q05996 745 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 SCRN1Q12765 414 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 TARBP2Q15633 366 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 GALNT17Q6IS24 598 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 CPLX2Q6PUV4 134 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 MIER3Q7Z3K6 550 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 ELAC1Q9H777 363 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 NRBP2Q9NSY0 501 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 RNF216Q9NWF9 866 aaPredicted RBP19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 FAM50BQ9Y247 325 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 PCDHGC5Q9Y5F6 944 aa19.61■□□□□ 0.73
CHMP1A-205ENST00000548650 STK36Q9NRP7 1315 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 SLC37A4O43826 429 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 GPC3P51654 580 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 TBC1D8BQ0IIM8 1120 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 NONOQ15233 471 aaKnown RBP eCLIP19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 CLUL1Q15846 466 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 TMEM31Q5JXX7 168 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 KRT25Q7Z3Z0 450 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 ZNF710Q8N1W2 664 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 ZNF668Q96K58 619 aaPredicted RBP19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 CEP89Q96ST8 783 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 IGFLR1Q9H665 355 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 RNF19AQ9NV58 838 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 PRKAG3Q9UGI9 489 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 SEPT9Q9UHD8 586 aaPredicted RBP19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 KCNJ14Q9UNX9 436 aa19.6■□□□□ 0.73
CHMP1A-205ENST00000548650 TMEM150BA6NC51 233 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 FAM86C2PA6NEL3 165 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 STBD1O95210 358 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 DARSP14868 501 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms