RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 PIGBQ92521 554 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 IP6K1Q92551 441 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 ALG3Q92685 438 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 EPB41L1Q9H4G0 881 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 CNTD2Q9H8S5 307 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 TMOD3Q9NYL9 352 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 SIT1Q9Y3P8 196 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 TRAF6Q9Y4K3 522 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 HCFC2Q9Y5Z7 792 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 SBNO2Q9Y2G9 1366 aa5.76□□□□□ -1.49
CBX5-203ENST00000547872 COL5A3P25940 1745 aaPredicted RBP5.75□□□□□ -1.49
CBX5-203ENST00000547872 DDNO94850 711 aaPredicted RBP5.75□□□□□ -1.49
CBX5-203ENST00000547872 MED14OSP0DP75 135 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 GYS1P13807 737 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 PFKLP17858 780 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 NAT1P18440 290 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 GRK2P25098 689 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 GRK3P35626 688 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 SLC6A11P48066 632 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 DDR1Q08345 913 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 SH3TC2Q8TF17 1288 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 KISS1RQ969F8 398 aaPredicted RBP5.75□□□□□ -1.49
CBX5-203ENST00000547872 TSPAN17Q96FV3 270 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 NDOR1Q9UHB4 597 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 A0A1W2PP64 1363 aa5.75□□□□□ -1.49
CBX5-203ENST00000547872 N4BP3O15049 544 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 PPM1GO15355 546 aaPredicted RBP5.74□□□□□ -1.49
CBX5-203ENST00000547872 CYP27B1O15528 508 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 C6orf222P0C671 652 aaPredicted RBP5.74□□□□□ -1.49
CBX5-203ENST00000547872 C1QTNF9P0C862 333 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 CDR1P51861 262 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 EPHB3P54753 998 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 GUCY1A3Q02108 690 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 TARBP2Q15633 366 aaKnown RBP5.74□□□□□ -1.49
CBX5-203ENST00000547872 LDHDQ86WU2 507 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 NLGN1Q8N2Q7 840 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 MZB1Q8WU39 189 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 ZNF622Q969S3 477 aaKnown RBP eCLIP5.74□□□□□ -1.491e-7■□□□□ 9.9
CBX5-203ENST00000547872 COG3Q96JB2 828 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 GCM1Q9NP62 436 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 PPARGC1AQ9UBK2 798 aaKnown RBP5.74□□□□□ -1.49
CBX5-203ENST00000547872 ROCK2O75116 1388 aaKnown RBP5.74□□□□□ -1.49
CBX5-203ENST00000547872 CD163L1Q9NR16 1453 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 LTBP1Q14766 1721 aa5.74□□□□□ -1.49
CBX5-203ENST00000547872 WDR33Q9C0J8 1336 aaKnown RBP5.74□□□□□ -1.49
CBX5-203ENST00000547872 DLEC1Q9Y238 1755 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 CARMIL3Q8ND23 1372 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 FAM47E-STBD1D6RA91 191 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 KRIT1O00522 736 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 HGSO14964 777 aaPredicted RBP5.73□□□□□ -1.49
CBX5-203ENST00000547872 MAFKO60675 156 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 EFCAB14O75071 495 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 SOD2P04179 222 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 NCKAP1LP55160 1127 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 STEAP3Q658P3 488 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 CYP4F22Q6NT55 531 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 MILR1Q7Z6M3 343 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 C2CD5Q86YS7 1000 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 SIGLEC10Q96LC7 697 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 KCNJ15Q99712 375 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 JAM3Q9BX67 310 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 SLC12A5Q9H2X9 1139 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 BCAS3Q9H6U6 928 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 SFMBT1Q9UHJ3 866 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 PALD1Q9ULE6 856 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 CNOT6Q9ULM6 557 aaKnown RBP5.73□□□□□ -1.49
CBX5-203ENST00000547872 SMG5Q9UPR3 1016 aaKnown RBP5.73□□□□□ -1.49
CBX5-203ENST00000547872 FAN1Q9Y2M0 1017 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 IRAK3Q9Y616 596 aa5.73□□□□□ -1.49
CBX5-203ENST00000547872 COL11A2P13942 1736 aaPredicted RBP5.73□□□□□ -1.49
CBX5-203ENST00000547872 EDC4Q6P2E9 1401 aaKnown RBP5.73□□□□□ -1.49
CBX5-203ENST00000547872 AFDNP55196 1824 aaKnown RBP5.72□□□□□ -1.49
CBX5-203ENST00000547872 NPIPB6E9PJ23 425 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 RFXAPO00287 272 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 SGSM2O43147 1006 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 BUB1BO60566 1050 aaPredicted RBP5.72□□□□□ -1.49
CBX5-203ENST00000547872 GNAT1P11488 350 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 NCAM1P13591 858 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 PMLP29590 882 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 SPIRE1Q08AE8 756 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 PAK1Q13153 545 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 KCNA10Q16322 511 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 DEFB115Q30KQ5 88 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.72□□□□□ -1.49
CBX5-203ENST00000547872 YIPF4Q9BSR8 244 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 MRPL4Q9BYD3 311 aaKnown RBP5.72□□□□□ -1.49
CBX5-203ENST00000547872 RNF38Q9H0F5 515 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 IPPKQ9H8X2 491 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 CD320Q9NPF0 282 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 ZNF652Q9Y2D9 606 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 PCDHB4Q9Y5E5 795 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 PCDHA5Q9Y5H7 936 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 RNF123Q5XPI4 1314 aa5.72□□□□□ -1.49
CBX5-203ENST00000547872 NPHP1O15259 732 aa5.71□□□□□ -1.5
CBX5-203ENST00000547872 CRTAMO95727 393 aa5.71□□□□□ -1.5
CBX5-203ENST00000547872 KRT1P04264 644 aa5.71□□□□□ -1.5
CBX5-203ENST00000547872 ASGR2P07307 311 aa5.71□□□□□ -1.5
CBX5-203ENST00000547872 MAP2K1Q02750 393 aaPredicted RBP5.71□□□□□ -1.5
CBX5-203ENST00000547872 SQSTM1Q13501 440 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms