RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RRADP55042 308 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 JAM2P57087 298 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 PURAQ00577 322 aaKnown RBP5.67□□□□□ -1.5
SCAF11-210ENST00000547654 PWP2Q15269 919 aaKnown RBP5.67□□□□□ -1.5
SCAF11-210ENST00000547654 GPR19Q15760 415 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 IGFL4Q6B9Z1 124 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 OVCH1Q7RTY7 1134 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 POLNQ7Z5Q5 900 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 FGD2Q7Z6J4 655 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 OSTM1Q86WC4 334 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 FMNL3Q8IVF7 1028 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 CCDC146Q8IYE0 955 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 FAM9AQ8IZU1 332 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-210ENST00000547654 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 OR14A2Q96R54 314 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 TRIM8Q9BZR9 551 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 TCEAL9Q9UHQ7 104 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 FAM83GA6ND36 823 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 RASGRP1O95267 797 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 ASMTLO95671 621 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 MAP4K4O95819 1239 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-210ENST00000547654 POLD1P28340 1107 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 MECP2P51608 486 aaKnown RBP5.66□□□□□ -1.5
SCAF11-210ENST00000547654 DBPQ10586 325 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-210ENST00000547654 ZMAT1Q5H9K5 638 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 CT47A1Q5JQC4 288 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-210ENST00000547654 ARHGAP36Q6ZRI8 547 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 AMER2Q8N7J2 671 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 FBXW5Q969U6 566 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 DPYSL5Q9BPU6 564 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 MRPL4Q9BYD3 311 aaKnown RBP5.66□□□□□ -1.5
SCAF11-210ENST00000547654 NCOA5Q9HCD5 579 aaKnown RBP5.66□□□□□ -1.5
SCAF11-210ENST00000547654 NR2E1Q9Y466 385 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 SLC30A1Q9Y6M5 507 aa5.66□□□□□ -1.5
SCAF11-210ENST00000547654 TCRBV16S1A1N1A0A5B0 115 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 NARSO43776 548 aaKnown RBP5.65□□□□□ -1.5
SCAF11-210ENST00000547654 VIL1P09327 827 aaKnown RBP5.65□□□□□ -1.5
SCAF11-210ENST00000547654 DGCR2P98153 550 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 DPTQ07507 201 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 RNF151Q2KHN1 245 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 TKFCQ3LXA3 575 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 C1orf210Q8IVY1 113 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 ZSWIM2Q8NEG5 633 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 NEU4Q8WWR8 484 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-210ENST00000547654 DLG3Q92796 817 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 PLEKHG4BQ96PX9 1271 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 CDC6Q99741 560 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 IKZF4Q9H2S9 585 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 C12orf65Q9H3J6 166 aaKnown RBP5.65□□□□□ -1.5
SCAF11-210ENST00000547654 GABBR1Q9UBS5 961 aa5.65□□□□□ -1.5
SCAF11-210ENST00000547654 CCDC163A0A0D9SF12 145 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 RASSF10A6NK89 507 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 PRC1O43663 620 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 CLASP2O75122 1294 aaKnown RBP5.64□□□□□ -1.51
SCAF11-210ENST00000547654 ZBTB48P10074 688 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-210ENST00000547654 PTPN1P18031 435 aaKnown RBP5.64□□□□□ -1.51
SCAF11-210ENST00000547654 INHBCP55103 352 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 TBX4P57082 545 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 GUCY1A3Q02108 690 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 STILQ15468 1287 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 FIGNQ5HY92 759 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 DPP8Q6V1X1 898 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-210ENST00000547654 OTOP1Q7RTM1 612 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 KRT26Q7Z3Y9 468 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 PTRH1Q86Y79 214 aaKnown RBP5.64□□□□□ -1.51
SCAF11-210ENST00000547654 CHAC2Q8WUX2 184 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 ALG1Q9BT22 464 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 CELF4Q9BZC1 486 aaKnown RBP5.64□□□□□ -1.51
SCAF11-210ENST00000547654 SLC39A2Q9NP94 309 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 CD2APQ9Y5K6 639 aa5.64□□□□□ -1.51
SCAF11-210ENST00000547654 CCDC66A2RUB6 948 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 ADH4P08319 380 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 C1SP09871 688 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 ACRV1P26436 265 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 ETV4P43268 484 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 TOP3AQ13472 1001 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-210ENST00000547654 WDR72Q3MJ13 1102 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 BRAPQ7Z569 592 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 MFSD3Q96ES6 412 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 PLA2G12BQ9BX93 195 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 AMNQ9BXJ7 453 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 ARHGAP28Q9P2N2 729 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 MCM8Q9UJA3 840 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 ATP8A1Q9Y2Q0 1164 aa5.63□□□□□ -1.51
SCAF11-210ENST00000547654 EFCAB14O75071 495 aa5.62□□□□□ -1.51
SCAF11-210ENST00000547654 HMGCRP04035 888 aa5.62□□□□□ -1.51
SCAF11-210ENST00000547654 AOAHP28039 575 aa5.62□□□□□ -1.51
SCAF11-210ENST00000547654 SOX5P35711 763 aa5.62□□□□□ -1.51
SCAF11-210ENST00000547654 RPS19P39019 145 aaKnown RBP5.62□□□□□ -1.51
SCAF11-210ENST00000547654 EXOSC10Q01780 885 aaKnown RBP5.62□□□□□ -1.51
SCAF11-210ENST00000547654 DALRD3Q5D0E6 543 aaKnown RBP5.62□□□□□ -1.51
SCAF11-210ENST00000547654 MTDHQ86UE4 582 aaKnown RBP5.62□□□□□ -1.51
SCAF11-210ENST00000547654 SCYL1Q96KG9 808 aa5.62□□□□□ -1.51
SCAF11-210ENST00000547654 GEMIN8Q9NWZ8 242 aaKnown RBP5.62□□□□□ -1.51
SCAF11-210ENST00000547654 COQ6Q9Y2Z9 468 aa5.62□□□□□ -1.51
SCAF11-210ENST00000547654 B3GALT1Q9Y5Z6 326 aa5.62□□□□□ -1.51
SCAF11-210ENST00000547654 A0A087X1B8 175 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 ALG1L2C9J202 215 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 DVL2O14641 736 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms