RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 FAM189BP81408 668 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 FAM102BQ5T8I3 360 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 PTCRAQ6ISU1 281 aaPredicted RBP15.07■□□□□ 0
CPSF6-204ENST00000547486 B3GNT9Q6UX72 402 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 PABPC5Q96DU9 382 aaKnown RBP15.07■□□□□ 0
CPSF6-204ENST00000547486 ZNF668Q96K58 619 aaPredicted RBP15.07■□□□□ 0
CPSF6-204ENST00000547486 MBOAT7Q96N66 472 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 PLVAPQ9BX97 442 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 TEKT3Q9BXF9 490 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 NRBP2Q9NSY0 501 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 LRFN2Q9ULH4 789 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 CEP131Q9UPN4 1083 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 PCDHB7Q9Y5E2 793 aa15.07■□□□□ 0
CPSF6-204ENST00000547486 DENND3A2RUS2 1198 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 TMEM150BA6NC51 233 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 GRXCR2A6NFK2 248 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 ITGB1P05556 798 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 SFNP31947 248 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 NLRP11P59045 1033 aaKnown RBP15.06■□□□□ 0
CPSF6-204ENST00000547486 PRKCEQ02156 737 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 HYAL1Q12794 435 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 DSC3Q14574 896 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 TARBP2Q15633 366 aaKnown RBP15.06■□□□□ 0
CPSF6-204ENST00000547486 INF2Q27J81 1249 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 CPLX2Q6PUV4 134 aaKnown RBP15.06■□□□□ 0
CPSF6-204ENST00000547486 EP400NLQ6ZTU2 488 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 SLC24A5Q71RS6 500 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 KLHL23Q8NBE8 558 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 ETNPPLQ8TBG4 499 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 SPPL3Q8TCT6 385 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 P2RX5Q93086 422 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 FAM167AQ96KS9 214 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 CEP89Q96ST8 783 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 PHF20Q9BVI0 1012 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 C22orf23Q9BZE7 217 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 LMAN2LQ9H0V9 348 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 PPP4R2Q9NY27 417 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 RAPGEFL1Q9UHV5 662 aa15.06■□□□□ 0
CPSF6-204ENST00000547486 BDP1A6H8Y1 2624 aa15.05■□□□□ 0
CPSF6-204ENST00000547486 PFKFB2O60825 505 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 CTDNEP1O95476 244 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 MMP1P03956 469 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 JAK3P52333 1124 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 DLX2Q07687 328 aaPredicted RBP15.05■□□□□ -0
CPSF6-204ENST00000547486 DRP2Q13474 957 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 NONOQ15233 471 aaKnown RBP eCLIP15.05■□□□□ -0
CPSF6-204ENST00000547486 CTC1Q2NKJ3 1217 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 GALNT17Q6IS24 598 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 FAM178BQ8IXR5 827 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 OXER1Q8TDS5 423 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 SH2D3AQ9BRG2 576 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 NIFKQ9BYG3 293 aaKnown RBP15.05■□□□□ -0
CPSF6-204ENST00000547486 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ -0
CPSF6-204ENST00000547486 C1orf112Q9NSG2 853 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 CLDND1Q9NY35 253 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 HCSTQ9UBK5 93 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 AKT3Q9Y243 479 aa15.05■□□□□ -0
CPSF6-204ENST00000547486 BRWD1Q9NSI6 2320 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 TBKBP1A7MCY6 615 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 EML1O00423 815 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 SLC37A4O43826 429 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 FGFR1P11362 822 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 COL9A1P20849 921 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 EIF4BP23588 611 aaKnown RBP15.04■□□□□ -0
CPSF6-204ENST00000547486 IRS1P35568 1242 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 NAALADL2Q58DX5 795 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 ODR4Q5SWX8 454 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 MOXD1Q6UVY6 613 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 FAM43BQ6ZT52 329 aaPredicted RBP15.04■□□□□ -0
CPSF6-204ENST00000547486 MIER3Q7Z3K6 550 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 KRT25Q7Z3Z0 450 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 FAM177A1Q8N128 213 aaPredicted RBP15.04■□□□□ -0
CPSF6-204ENST00000547486 IGFLR1Q9H665 355 aa15.04■□□□□ -0
CPSF6-204ENST00000547486 TYW1Q9NV66 732 aaKnown RBP15.04■□□□□ -0
CPSF6-204ENST00000547486 DDX25Q9UHL0 483 aaKnown RBP15.04■□□□□ -0
CPSF6-204ENST00000547486 LINC01565O15544 149 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 FDPSP14324 419 aaKnown RBP15.03■□□□□ -0
CPSF6-204ENST00000547486 FGFR4P22455 802 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 TMOD1P28289 359 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 GPC3P51654 580 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 AK2P54819 239 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 LETM2Q2VYF4 491 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 MTERF2Q49AM1 385 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 EARS2Q5JPH6 523 aaKnown RBP15.03■□□□□ -0
CPSF6-204ENST00000547486 ADGRD2Q7Z7M1 963 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 NECAB1Q8N987 351 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 RDM1Q8NG50 284 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 POF1BQ8WVV4 589 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 MAP7D2Q96T17 732 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 RNF19AQ9NV58 838 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 TMEM161AQ9NX61 479 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 PCDHGC5Q9Y5F6 944 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 NCOR1O75376 2440 aa15.03■□□□□ -0
CPSF6-204ENST00000547486 MYO7AQ13402 2215 aa15.02■□□□□ -0
CPSF6-204ENST00000547486 IGKV6-21A0A0C4DH24 114 aa15.02■□□□□ -0
CPSF6-204ENST00000547486 NCK2O43639 380 aa15.02■□□□□ -0
CPSF6-204ENST00000547486 CSDE1O75534 798 aaKnown RBP15.02■□□□□ -0
CPSF6-204ENST00000547486 CDKL5O76039 1030 aa15.02■□□□□ -0
CPSF6-204ENST00000547486 DARSP14868 501 aaKnown RBP15.02■□□□□ -0
CPSF6-204ENST00000547486 ANAPC15P60006 121 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms