RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 STX1AQ16623 288 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 KIAA0753Q2KHM9 967 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 RETREG2Q8NC44 543 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 KAT2BQ92831 832 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 ERCC4Q92889 916 aaPredicted RBP17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 RNF208Q9H0X6 261 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 DHX33Q9H6R0 707 aaKnown RBP17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 C17orf75Q9HAS0 396 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 ANO10Q9NW15 660 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 LARSQ9P2J5 1176 aaKnown RBP17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 KAT6AQ92794 2004 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 NRCAMQ92823 1304 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 FRMD3A2A2Y4 597 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 TMEM150BA6NC51 233 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 MYADML2A6NDP7 307 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 KLRC4O43908 158 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 MAFO75444 373 aaPredicted RBP17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 CAVIN2O95810 425 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 ASGR1P07306 291 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 GNAT1P11488 350 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 INSRRP14616 1297 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 CASP1P29466 404 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 PPP1R2P41236 205 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 DNM2P50570 870 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 PPFIA1Q13136 1202 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 EMC2Q15006 297 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 KCNA10Q16322 511 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 KMT5BQ4FZB7 885 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 LRSAM1Q6UWE0 723 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 SLC17A8Q8NDX2 589 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 TCP11Q8WWU5 503 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 PARVGQ9HBI0 331 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 PDLIM7Q9NR12 457 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 DACH1Q9UI36 760 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 MAN1B1Q9UKM7 699 aa17.55■□□□□ 0.4
TRAFD1-203ENST00000547063 FRMPD3Q5JV73 1810 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 KBTBD13C9JR72 458 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 HIP1RO75146 1068 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 KIF20AO95235 890 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 ZNF131P52739 623 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 RTP1P59025 263 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 NLRP12P59046 1061 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 TYRO3Q06418 890 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 RAD51AP2Q09MP3 1159 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 MORC3Q14149 939 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 HERC4Q5GLZ8 1057 aaPredicted RBP17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 FAM102BQ5T8I3 360 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 ZNF658Q5TYW1 1059 aaPredicted RBP17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 CCSAPQ6IQ19 270 aaPredicted RBP17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 C7orf31Q8N865 590 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 MLKLQ8NB16 471 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 ZNF333Q96JL9 665 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 CEP89Q96ST8 783 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 SH2D3AQ9BRG2 576 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 SEZ6LQ9BYH1 1024 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 ZHX3Q9H4I2 956 aa17.54■□□□□ 0.4
TRAFD1-203ENST00000547063 MYH11P35749 1972 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 ZBTB42B2RXF5 422 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 BIN1O00499 593 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 SCP2P22307 547 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 TMOD1P28289 359 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 ABCD1P33897 745 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 IRX5P78411 483 aaPredicted RBP17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 COASYQ13057 564 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 STIM1Q13586 685 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 PPP2R5AQ15172 486 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 GRIK4Q16099 956 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 CT47A1Q5JQC4 288 aaPredicted RBP17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 FAM26FQ5R3K3 315 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 IER5Q5VY09 327 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 CXCL17Q6UXB2 119 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 STXBP4Q6ZWJ1 553 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 MYCT1Q8N699 235 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 IFT74Q96LB3 600 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 NAT10Q9H0A0 1025 aaKnown RBP17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 OLFML3Q9NRN5 406 aa17.53■□□□□ 0.4
TRAFD1-203ENST00000547063 SCN10AQ9Y5Y9 1956 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 IGKV6-21A0A0C4DH24 114 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 H0YCG3 227 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 SMIM10L2AP0DMW4 78 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 SMIM10L2BP0DMW5 78 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 MAPTP10636 758 aaKnown RBP17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 PLS3P13797 630 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 ACLYP53396 1101 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 SMTNP53814 917 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 CHMP4BP1P59074 171 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 EHHADHQ08426 723 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 MTFR1Q15390 333 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 ODR4Q5SWX8 454 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 GLT1D1Q96MS3 346 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 DEFB118Q96PH6 123 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 FUCA2Q9BTY2 467 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 TSPY26PQ9H489 355 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 XPNPEP1Q9NQW7 623 aa17.52■□□□□ 0.4
TRAFD1-203ENST00000547063 C17orf102A2RUQ5 167 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 DNM1LO00429 736 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 ASAP2O43150 1006 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms