RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 BICD1Q96G01 975 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 MBOAT7Q96N66 472 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 TYW1Q9NV66 732 aaKnown RBP13.92□□□□□ -0.18
SCAF11-209ENST00000547018 SIPA1L1O43166 1804 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CNTN2Q02246 1040 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 FSTL1Q12841 308 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 TRAF1Q13077 416 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 MEA1Q16626 185 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CC2D1AQ6P1N0 951 aaPredicted RBP13.91□□□□□ -0.18
SCAF11-209ENST00000547018 ANKRD35Q8N283 1001 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 SLC16A10Q8TF71 515 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 RABGGTAQ92696 567 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 POLR3CQ9BUI4 534 aaPredicted RBP13.91□□□□□ -0.18
SCAF11-209ENST00000547018 MTFR1LQ9H019 292 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 GABBR1Q9UBS5 961 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 PPP1R9AQ9ULJ8 1098 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 PIK3CDO00329 1044 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 VWA5AO00534 786 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 PON1P27169 355 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 YWHABP31946 246 aaKnown RBP13.91□□□□□ -0.18
SCAF11-209ENST00000547018 SSTR3P32745 418 aaPredicted RBP13.91□□□□□ -0.18
SCAF11-209ENST00000547018 MTERF2Q49AM1 385 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 MOXD1Q6UVY6 613 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 GBP6Q6ZN66 633 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CCDC170Q8IYT3 715 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CEP170P1Q96L14 293 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 ANKZF1Q9H8Y5 726 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 ESYT3A0FGR9 886 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 ADM5C9JUS6 153 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CTNND1O60716 968 aaKnown RBP13.91□□□□□ -0.18
SCAF11-209ENST00000547018 PALMO75781 387 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 NR3C2P08235 984 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
SCAF11-209ENST00000547018 BACE1P56817 501 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 EPHA7Q15375 998 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CBWD6Q4V339 395 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CBWD3Q5JTY5 395 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CBWD5Q5RIA9 395 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 NCAPG2Q86XI2 1143 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 HDAC7Q8WUI4 952 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CEP63Q96MT8 703 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 ALS2CR12Q96Q35 445 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 SLC38A10Q9HBR0 1119 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CEP72Q9P209 647 aa13.91□□□□□ -0.18
SCAF11-209ENST00000547018 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
SCAF11-209ENST00000547018 CYP3A4P08684 503 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 TGFB2P61812 414 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 NAA35Q5VZE5 725 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 GTPBP4Q9BZE4 634 aaKnown RBP13.9□□□□□ -0.18
SCAF11-209ENST00000547018 TMOD4Q9NZQ9 345 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 PITPNM2Q9BZ72 1349 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 PSMC2P35998 433 aaKnown RBP13.9□□□□□ -0.18
SCAF11-209ENST00000547018 PGM5Q15124 567 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 RSRC2Q7L4I2 434 aaKnown RBP13.9□□□□□ -0.18
SCAF11-209ENST00000547018 ZNF720Q7Z2F6 126 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 MCF2L2Q86YR7 1114 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 SLC35C1Q96A29 364 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
SCAF11-209ENST00000547018 LARSQ9P2J5 1176 aaKnown RBP13.9□□□□□ -0.18
SCAF11-209ENST00000547018 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.19
SCAF11-209ENST00000547018 PDXKO00764 312 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 N4BP1O75113 896 aaKnown RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 GNA14O95837 355 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 CCNE2O96020 404 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 PTPRAP18433 802 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 MARK3P27448 753 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 ZNF571Q7Z3V5 609 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 KLHL7Q8IXQ5 586 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 PDE11AQ9HCR9 933 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 MAP2K1Q02750 393 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 SEZ6Q53EL9 994 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 EAPPQ56P03 285 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 DCAF15Q66K64 600 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 HGSNATQ68CP4 663 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 DAW1Q8N136 415 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 IFT81Q8WYA0 676 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 NOX5Q96PH1 765 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 KIAA1683Q9H0B3 1180 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 AGO4Q9HCK5 861 aaKnown RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 TUFT1Q9NNX1 390 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 AGPAT3Q9NRZ7 376 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 KRT13P13646 458 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 MMP14P50281 582 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 HIRAP54198 1017 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 HAUS6Q7Z4H7 955 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 PPM1KQ8N3J5 372 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 RBM46Q8TBY0 533 aaKnown RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 KAT5Q92993 513 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 R3HDMLQ9H3Y0 253 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 UBE2TQ9NPD8 197 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 TOPORSQ9NS56 1045 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-209ENST00000547018 DNAJC12Q9UKB3 198 aa13.89□□□□□ -0.19
SCAF11-209ENST00000547018 MYH11P35749 1972 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms