RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 TRIM8Q9BZR9 551 aa8.17□□□□□ -1.1
NPAS3-204ENST00000546849 KLHL42Q9P2K6 505 aa8.17□□□□□ -1.1
NPAS3-204ENST00000546849 K7ESF4 209 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 MPIG6BO95866 241 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 NEK2P51955 445 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 ERVK-21P61565 698 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 ADAM9Q13443 819 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 ZNF385BQ569K4 471 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 TGFBRAP1Q8WUH2 860 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 PWWP2AQ96N64 755 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 NOX5Q96PH1 765 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 AMNQ9BXJ7 453 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 KRTAP4-7Q9BYR0 210 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 WNT8AQ9H1J5 351 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 SYNPO2Q9UMS6 1093 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 KCTD3Q9Y597 815 aa8.16□□□□□ -1.1
NPAS3-204ENST00000546849 H0Y858 1186 aa8.15□□□□□ -1.1
NPAS3-204ENST00000546849 XPOTO43592 962 aaKnown RBP8.15□□□□□ -1.1
NPAS3-204ENST00000546849 MYBPC3Q14896 1274 aa8.15□□□□□ -1.1
NPAS3-204ENST00000546849 ACAP2Q15057 778 aa8.15□□□□□ -1.1
NPAS3-204ENST00000546849 TTF1Q15361 905 aaPredicted RBP8.15□□□□□ -1.1
NPAS3-204ENST00000546849 CT83Q5H943 113 aa8.15□□□□□ -1.1
NPAS3-204ENST00000546849 CHMP4CQ96CF2 233 aa8.15□□□□□ -1.1
NPAS3-204ENST00000546849 L2HGDHQ9H9P8 463 aa8.15□□□□□ -1.1
NPAS3-204ENST00000546849 DNAJC28Q9NX36 388 aa8.15□□□□□ -1.1
NPAS3-204ENST00000546849 FTSJ1Q9UET6 329 aa8.15□□□□□ -1.1
NPAS3-204ENST00000546849 GABRDO14764 452 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 SNUPNO95149 360 aaKnown RBP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 CT47B1P0C2W7 299 aaPredicted RBP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 MED14OSP0DP75 135 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 ENPP1P22413 925 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 THBS2P35442 1172 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 EPHB1P54762 984 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 MANFP55145 182 aaKnown RBP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 IL13RA1P78552 427 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 MESP2Q0VG99 397 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 NOLC1Q14978 699 aaKnown RBP eCLIP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 PDCD1Q15116 288 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 FSCN1Q16658 493 aaKnown RBP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 ZNF648Q5T619 568 aaPredicted RBP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 CXXC5Q7LFL8 322 aaKnown RBP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 FAM129CQ86XR2 697 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 IFNL2Q8IZJ0 200 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 LINC00482Q8N8I6 264 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 QRSL1Q9H0R6 528 aaKnown RBP8.14□□□□□ -1.11
NPAS3-204ENST00000546849 SEMA4AQ9H3S1 761 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 MTG2Q9H4K7 406 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 NTMQ9P121 344 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 FBXO10Q9UK96 956 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 WASF3Q9UPY6 502 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 PPP2R3BQ9Y5P8 575 aa8.14□□□□□ -1.11
NPAS3-204ENST00000546849 PCDH8O95206 1070 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 CHGBP05060 677 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 MTHFD2P13995 350 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 XPAP23025 273 aaPredicted RBP8.13□□□□□ -1.11
NPAS3-204ENST00000546849 ADCY8P40145 1251 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 RAP1GAPP47736 663 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 SSPNQ14714 243 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 ZBTB41Q5SVQ8 909 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 LMBR1Q8WVP7 490 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 RAX2Q96IS3 184 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 KCND1Q9NSA2 647 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 CCM2LQ9NUG4 571 aaPredicted RBP8.13□□□□□ -1.11
NPAS3-204ENST00000546849 KCMF1Q9P0J7 381 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 USP18Q9UMW8 372 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 EDARQ9UNE0 448 aa8.13□□□□□ -1.11
NPAS3-204ENST00000546849 SMG5Q9UPR3 1016 aaKnown RBP8.13□□□□□ -1.11
NPAS3-204ENST00000546849 PRSS38A1L453 326 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 CD83Q01151 205 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 PPARAQ07869 468 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 DGKDQ16760 1214 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 GRAMD4Q6IC98 578 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 CMIPQ8IY22 773 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 TMEFF1Q8IYR6 380 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 FNIP1Q8TF40 1166 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 EAF2Q96CJ1 260 aaPredicted RBP8.12□□□□□ -1.11
NPAS3-204ENST00000546849 FUBP3Q96I24 572 aaKnown RBP eCLIP8.12□□□□□ -1.11
NPAS3-204ENST00000546849 HIST1H2AHQ96KK5 128 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 HIST1H2AJQ99878 128 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 NOL10Q9BSC4 688 aaKnown RBP8.12□□□□□ -1.11
NPAS3-204ENST00000546849 ZBTB21Q9ULJ3 1066 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 INVSQ9Y283 1065 aa8.12□□□□□ -1.11
NPAS3-204ENST00000546849 ELL2O00472 640 aaPredicted RBP8.11□□□□□ -1.11
NPAS3-204ENST00000546849 TSPAN15O95858 294 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 IL18BPO95998 194 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
NPAS3-204ENST00000546849 CYP1A1P04798 512 aaPredicted RBP8.11□□□□□ -1.11
NPAS3-204ENST00000546849 LPLP06858 475 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 C1QTNF9P0C862 333 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 MOGSQ13724 837 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 SPIDRQ14159 915 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 TOR2AQ5JU69 321 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 TMEM151BQ8IW70 566 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 C1orf162Q8NEQ5 155 aaPredicted RBP8.11□□□□□ -1.11
NPAS3-204ENST00000546849 OR5AN1Q8NGI8 311 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 RSAD2Q8WXG1 361 aa8.11□□□□□ -1.11
NPAS3-204ENST00000546849 MYPNQ86TC9 1320 aa8.1□□□□□ -1.11
NPAS3-204ENST00000546849 E2F8A0AVK6 867 aa8.1□□□□□ -1.11
NPAS3-204ENST00000546849 NRP2O60462 931 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms