RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 GRB10Q13322 594 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 SPECC1Q5M775 1068 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 NME8Q8N427 588 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 GDF15Q99988 308 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 RSPH10B2B2RC85 870 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 CTSHP09668 335 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 RSPH10BP0C881 870 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 NCLP19338 710 aaKnown RBP22.84■■□□□ 1.25
HMGA2-211ENST00000545998 TMOD1P28289 359 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 FPGSQ05932 587 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 MGAT3Q09327 533 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 ZRSR1Q15695 479 aaKnown RBP22.84■■□□□ 1.25
HMGA2-211ENST00000545998 TMEM119Q4V9L6 283 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 FAM26DQ5JW98 314 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 USP49Q70CQ1 688 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 EXOC8Q8IYI6 725 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 SLC7A3Q8WY07 619 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 EPSTI1Q96J88 318 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 IPO9Q96P70 1041 aaKnown RBP22.84■■□□□ 1.25
HMGA2-211ENST00000545998 JPH2Q9BR39 696 aaPredicted RBP22.84■■□□□ 1.25
HMGA2-211ENST00000545998 CCSER1Q9C0I3 900 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 NT5C3AQ9H0P0 336 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 SUGCTQ9HAC7 445 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 CHRNA1P02708 482 aa22.83■■□□□ 1.25
HMGA2-211ENST00000545998 POLGP54098 1239 aaPredicted RBP22.83■■□□□ 1.25
HMGA2-211ENST00000545998 MKRN4PQ13434 485 aaPredicted RBP22.83■■□□□ 1.25
HMGA2-211ENST00000545998 MBTPS1Q14703 1052 aa22.83■■□□□ 1.25
HMGA2-211ENST00000545998 GPNMBQ14956 572 aa22.83■■□□□ 1.25
HMGA2-211ENST00000545998 KCNK18Q7Z418 384 aa22.83■■□□□ 1.25
HMGA2-211ENST00000545998 KCTD17Q8N5Z5 321 aa22.83■■□□□ 1.25
HMGA2-211ENST00000545998 LEO1Q8WVC0 666 aaPredicted RBP22.83■■□□□ 1.25
HMGA2-211ENST00000545998 SYMPKQ92797 1274 aaKnown RBP22.83■■□□□ 1.25
HMGA2-211ENST00000545998 VWCEQ96DN2 955 aa22.83■■□□□ 1.25
HMGA2-211ENST00000545998 CCDC43Q96MW1 224 aaKnown RBP22.83■■□□□ 1.25
HMGA2-211ENST00000545998 DNM3Q9UQ16 869 aa22.83■■□□□ 1.25
HMGA2-211ENST00000545998 CUTAO60888 179 aa22.82■■□□□ 1.24
HMGA2-211ENST00000545998 PARNO95453 639 aaKnown RBP22.82■■□□□ 1.24
HMGA2-211ENST00000545998 RFC2P35250 354 aa22.82■■□□□ 1.24
HMGA2-211ENST00000545998 MRPS6P82932 125 aaKnown RBP22.82■■□□□ 1.24
HMGA2-211ENST00000545998 TMEM62Q0P6H9 643 aa22.82■■□□□ 1.24
HMGA2-211ENST00000545998 DRP2Q13474 957 aa22.82■■□□□ 1.24
HMGA2-211ENST00000545998 AXDND1Q5T1B0 1012 aaPredicted RBP22.82■■□□□ 1.24
HMGA2-211ENST00000545998 CALML4Q96GE6 196 aa22.82■■□□□ 1.24
HMGA2-211ENST00000545998 CDK5RAP3Q96JB5 506 aa22.82■■□□□ 1.24
HMGA2-211ENST00000545998 PLIN2Q99541 437 aa22.82■■□□□ 1.24
HMGA2-211ENST00000545998 E9PMD0 336 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 DGAT1O75907 488 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 EYA4O95677 639 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 PPIGQ13427 754 aaKnown RBP eCLIP22.81■■□□□ 1.24
HMGA2-211ENST00000545998 EMC2Q15006 297 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 KARSQ15046 597 aaKnown RBP22.81■■□□□ 1.24
HMGA2-211ENST00000545998 PRPF38BQ5VTL8 546 aaKnown RBP22.81■■□□□ 1.24
HMGA2-211ENST00000545998 IER5Q5VY09 327 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 BHMT2Q9H2M3 363 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 CHMP5Q9NZZ3 219 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 PCDHA7Q9UN72 937 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 CDY2AQ9Y6F7 541 aa22.81■■□□□ 1.24
HMGA2-211ENST00000545998 GAS2O43903 313 aaKnown RBP22.8■■□□□ 1.24
HMGA2-211ENST00000545998 NBNO60934 754 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 VTNP04004 478 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 ME1P48163 572 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 DNM2P50570 870 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 EPHB4P54760 987 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 SPATA32Q96LK8 384 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 MAP7D2Q96T17 732 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 SCAND2PQ9GZW5 306 aaPredicted RBP22.8■■□□□ 1.24
HMGA2-211ENST00000545998 IL23AQ9NPF7 189 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 XPNPEP1Q9NQW7 623 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 BMP2KQ9NSY1 1161 aaPredicted RBP22.8■■□□□ 1.24
HMGA2-211ENST00000545998 AKT3Q9Y243 479 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 ARHGEF35A5YM69 484 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 CXCL10P02778 98 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 C16orf59Q7L2K0 433 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 LRRC15Q8TF66 581 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 MTRQ99707 1265 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 ATP6V0A4Q9HBG4 840 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 SUCLA2Q9P2R7 463 aaPredicted RBP22.8■■□□□ 1.24
HMGA2-211ENST00000545998 TRPV2Q9Y5S1 764 aa22.8■■□□□ 1.24
HMGA2-211ENST00000545998 M0QZ92 97 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 USO1O60763 962 aaKnown RBP22.79■■□□□ 1.24
HMGA2-211ENST00000545998 GPR32O75388 356 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 PLCG1P19174 1290 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 BMP8BP34820 402 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 TXLNAP40222 546 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 SHC4Q6S5L8 630 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 PADI6Q6TGC4 694 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 TMEM143Q96AN5 459 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 CELF4Q9BZC1 486 aaKnown RBP22.79■■□□□ 1.24
HMGA2-211ENST00000545998 OSBPL7Q9BZF2 842 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 PRO3102Q9H379 93 aa22.79■■□□□ 1.24
HMGA2-211ENST00000545998 ACRP10323 421 aa22.78■■□□□ 1.24
HMGA2-211ENST00000545998 KIZQ2M2Z5 673 aa22.78■■□□□ 1.24
HMGA2-211ENST00000545998 DEFB128Q7Z7B8 93 aa22.78■■□□□ 1.24
HMGA2-211ENST00000545998 RPUSD2Q8IZ73 545 aaKnown RBP22.78■■□□□ 1.24
HMGA2-211ENST00000545998 ZNF710Q8N1W2 664 aa22.78■■□□□ 1.24
HMGA2-211ENST00000545998 RASSF8Q8NHQ8 419 aa22.78■■□□□ 1.24
HMGA2-211ENST00000545998 ADAMTS10Q9H324 1103 aa22.78■■□□□ 1.24
HMGA2-211ENST00000545998 RBAK-RBAKDNI3L0D1 243 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 PFKMP08237 780 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 GPC3P51654 580 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms