RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 C1orf112Q9NSG2 853 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 RNF216Q9NWF9 866 aaPredicted RBP25.63■■□□□ 1.69
CHD4-214ENST00000545942 MRPL42Q9Y6G3 142 aaKnown RBP25.63■■□□□ 1.69
CHD4-214ENST00000545942 MGEA5O60502 916 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 KCNA5P22460 613 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 INF2Q27J81 1249 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 TCEAL5Q5H9L2 206 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 ZNF710Q8N1W2 664 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 LINC01465Q8N7H1 131 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 ETNPPLQ8TBG4 499 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 RGS18Q9NS28 235 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 DDX25Q9UHL0 483 aaKnown RBP25.63■■□□□ 1.69
CHD4-214ENST00000545942 AKT3Q9Y243 479 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 PCDHB7Q9Y5E2 793 aa25.63■■□□□ 1.69
CHD4-214ENST00000545942 NLRC5Q86WI3 1866 aa25.62■■□□□ 1.69
CHD4-214ENST00000545942 GRM6O15303 877 aa25.62■■□□□ 1.69
CHD4-214ENST00000545942 LEXMQ3ZCV2 418 aa25.62■■□□□ 1.69
CHD4-214ENST00000545942 PAN2Q504Q3 1202 aaKnown RBP25.62■■□□□ 1.69
CHD4-214ENST00000545942 B3GNT9Q6UX72 402 aa25.62■■□□□ 1.69
CHD4-214ENST00000545942 SLC24A5Q71RS6 500 aa25.62■■□□□ 1.69
CHD4-214ENST00000545942 FAM228AQ86W67 206 aa25.62■■□□□ 1.69
CHD4-214ENST00000545942 LRRC71Q8N4P6 559 aa25.62■■□□□ 1.69
CHD4-214ENST00000545942 CCDC194A0A1B0GVG4 234 aa25.61■■□□□ 1.69
CHD4-214ENST00000545942 IBSPP21815 317 aaPredicted RBP25.61■■□□□ 1.69
CHD4-214ENST00000545942 AK2P54819 239 aa25.61■■□□□ 1.69
CHD4-214ENST00000545942 NLRP11P59045 1033 aaKnown RBP25.61■■□□□ 1.69
CHD4-214ENST00000545942 LETM2Q2VYF4 491 aa25.61■■□□□ 1.69
CHD4-214ENST00000545942 P2RX5Q93086 422 aa25.61■■□□□ 1.69
CHD4-214ENST00000545942 MYH9P35579 1960 aaKnown RBP25.6■■□□□ 1.69
CHD4-214ENST00000545942 TCF20Q9UGU0 1960 aaKnown RBP25.6■■□□□ 1.69
CHD4-214ENST00000545942 EIF5BO60841 1220 aaKnown RBP25.6■■□□□ 1.69
CHD4-214ENST00000545942 TBC1D8BQ0IIM8 1120 aa25.6■■□□□ 1.69
CHD4-214ENST00000545942 NAALADL2Q58DX5 795 aa25.6■■□□□ 1.69
CHD4-214ENST00000545942 C9IYK1 514 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 SLC37A4O43826 429 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 MMP1P03956 469 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 GATMP50440 423 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 XKR3Q5GH77 459 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 NEK8Q86SG6 692 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 WASF1Q92558 559 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 PABPC5Q96DU9 382 aaKnown RBP25.59■■□□□ 1.69
CHD4-214ENST00000545942 ADAMTS10Q9H324 1103 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 ORC3Q9UBD5 711 aaPredicted RBP25.59■■□□□ 1.69
CHD4-214ENST00000545942 PLAGL2Q9UPG8 496 aa25.59■■□□□ 1.69
CHD4-214ENST00000545942 LOXHD1Q8IVV2 1947 aa25.58■■□□□ 1.69
CHD4-214ENST00000545942 CTDNEP1O95476 244 aa25.58■■□□□ 1.69
CHD4-214ENST00000545942 GCFC2P16383 781 aaKnown RBP25.58■■□□□ 1.69
CHD4-214ENST00000545942 COL19A1Q14993 1142 aa25.58■■□□□ 1.69
CHD4-214ENST00000545942 TARBP2Q15633 366 aaKnown RBP25.58■■□□□ 1.69
CHD4-214ENST00000545942 PPP4R3AQ6IN85 833 aa25.58■■□□□ 1.69
CHD4-214ENST00000545942 NEK9Q8TD19 979 aa25.58■■□□□ 1.69
CHD4-214ENST00000545942 NIFKQ9BYG3 293 aaKnown RBP25.58■■□□□ 1.69
CHD4-214ENST00000545942 ALG13Q9NP73 1137 aaKnown RBP25.58■■□□□ 1.69
CHD4-214ENST00000545942 GJB4Q9NTQ9 266 aa25.58■■□□□ 1.69
CHD4-214ENST00000545942 SEPT9Q9UHD8 586 aaPredicted RBP25.58■■□□□ 1.69
CHD4-214ENST00000545942 EVPLQ92817 2033 aa25.57■■□□□ 1.68
CHD4-214ENST00000545942 NCK2O43639 380 aa25.57■■□□□ 1.68
CHD4-214ENST00000545942 EIF4BP23588 611 aaKnown RBP25.57■■□□□ 1.68
CHD4-214ENST00000545942 GPC3P51654 580 aa25.57■■□□□ 1.68
CHD4-214ENST00000545942 DSC3Q14574 896 aa25.57■■□□□ 1.68
CHD4-214ENST00000545942 PIK3AP1Q6ZUJ8 805 aa25.57■■□□□ 1.68
CHD4-214ENST00000545942 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.57■■□□□ 1.68
CHD4-214ENST00000545942 FAM20AQ96MK3 541 aa25.57■■□□□ 1.68
CHD4-214ENST00000545942 NAP1L4Q99733 375 aaKnown RBP25.57■■□□□ 1.68
CHD4-214ENST00000545942 KCNMB3Q9NPA1 279 aa25.57■■□□□ 1.68
CHD4-214ENST00000545942 DTNBO60941 627 aa25.56■■□□□ 1.68
CHD4-214ENST00000545942 FAM189BP81408 668 aa25.56■■□□□ 1.68
CHD4-214ENST00000545942 PUS10Q3MIT2 529 aaKnown RBP25.56■■□□□ 1.68
CHD4-214ENST00000545942 MTERF2Q49AM1 385 aa25.56■■□□□ 1.68
CHD4-214ENST00000545942 EP400NLQ6ZTU2 488 aa25.56■■□□□ 1.68
CHD4-214ENST00000545942 OXER1Q8TDS5 423 aa25.56■■□□□ 1.68
CHD4-214ENST00000545942 SCLT1Q96NL6 688 aa25.56■■□□□ 1.68
CHD4-214ENST00000545942 ELAC1Q9H777 363 aaKnown RBP25.56■■□□□ 1.68
CHD4-214ENST00000545942 ATP6V0A4Q9HBG4 840 aa25.56■■□□□ 1.68
CHD4-214ENST00000545942 TMEM161AQ9NX61 479 aa25.56■■□□□ 1.68
CHD4-214ENST00000545942 TBKBP1A7MCY6 615 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 H3BQ06 376 aaPredicted RBP25.55■■□□□ 1.68
CHD4-214ENST00000545942 CCNT1O60563 726 aaKnown RBP25.55■■□□□ 1.68
CHD4-214ENST00000545942 STBD1O95210 358 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 ITGB1P05556 798 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 PSMC5P62195 406 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 PPP2R5CQ13362 524 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 ME3Q16798 604 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 FAM102BQ5T8I3 360 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 PTCRAQ6ISU1 281 aaPredicted RBP25.55■■□□□ 1.68
CHD4-214ENST00000545942 NECAB1Q8N987 351 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 KLHL23Q8NBE8 558 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 ZNF668Q96K58 619 aaPredicted RBP25.55■■□□□ 1.68
CHD4-214ENST00000545942 CLDND1Q9NY35 253 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 BRWD1Q9NSI6 2320 aa25.55■■□□□ 1.68
CHD4-214ENST00000545942 NCOR1O75376 2440 aa25.54■■□□□ 1.68
CHD4-214ENST00000545942 TMEM150BA6NC51 233 aa25.54■■□□□ 1.68
CHD4-214ENST00000545942 DARSP14868 501 aaKnown RBP25.54■■□□□ 1.68
CHD4-214ENST00000545942 ZSCAN20P17040 1043 aaPredicted RBP25.54■■□□□ 1.68
CHD4-214ENST00000545942 CDC42EP1Q00587 391 aa25.54■■□□□ 1.68
CHD4-214ENST00000545942 CAMK1Q14012 370 aa25.54■■□□□ 1.68
CHD4-214ENST00000545942 SPPL3Q8TCT6 385 aa25.54■■□□□ 1.68
CHD4-214ENST00000545942 NLRP7Q8WX94 980 aa25.54■■□□□ 1.68
CHD4-214ENST00000545942 GTF3C6Q969F1 213 aa25.54■■□□□ 1.68
CHD4-214ENST00000545942 CEP89Q96ST8 783 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms