RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 RAB30Q15771 203 aa24.37■■□□□ 1.49
OTUB1-212ENST00000543988 TMEM266Q2M3C6 531 aa24.37■■□□□ 1.49
OTUB1-212ENST00000543988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.37■■□□□ 1.49
OTUB1-212ENST00000543988 DEFB123Q8N688 67 aa24.37■■□□□ 1.49
OTUB1-212ENST00000543988 TMEM40Q8WWA1 233 aa24.37■■□□□ 1.49
OTUB1-212ENST00000543988 TIFAQ96CG3 184 aa24.37■■□□□ 1.49
OTUB1-212ENST00000543988 SQORQ9Y6N5 450 aa24.37■■□□□ 1.49
OTUB1-212ENST00000543988 WDR81Q562E7 1941 aa24.37■■□□□ 1.49
OTUB1-212ENST00000543988 LAD1O00515 517 aa24.36■■□□□ 1.49
OTUB1-212ENST00000543988 GPR32O75388 356 aa24.36■■□□□ 1.49
OTUB1-212ENST00000543988 MED24O75448 989 aa24.36■■□□□ 1.49
OTUB1-212ENST00000543988 IL17AQ16552 155 aa24.36■■□□□ 1.49
OTUB1-212ENST00000543988 USP38Q8NB14 1042 aa24.36■■□□□ 1.49
OTUB1-212ENST00000543988 OSMRQ99650 979 aa24.36■■□□□ 1.49
OTUB1-212ENST00000543988 MYOGP15173 224 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 PRPHP41219 470 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 CRYBB1P53674 252 aaPredicted RBP24.35■■□□□ 1.49
OTUB1-212ENST00000543988 NLRP11P59045 1033 aaKnown RBP24.35■■□□□ 1.49
OTUB1-212ENST00000543988 ATP2C1P98194 919 aaPredicted RBP24.35■■□□□ 1.49
OTUB1-212ENST00000543988 RESTQ13127 1097 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 PAK2Q13177 524 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 XKR9Q5GH70 373 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 ZNF697Q5TEC3 545 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 OTUD6AQ7L8S5 288 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 CATSPER3Q86XQ3 398 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 ERMNQ8TAM6 284 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 ZNF668Q96K58 619 aaPredicted RBP24.35■■□□□ 1.49
OTUB1-212ENST00000543988 POLR3CQ9BUI4 534 aaPredicted RBP24.35■■□□□ 1.49
OTUB1-212ENST00000543988 TTYH1Q9H313 450 aaPredicted RBP24.35■■□□□ 1.49
OTUB1-212ENST00000543988 ADAMTS10Q9H324 1103 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 DHX33Q9H6R0 707 aaKnown RBP24.35■■□□□ 1.49
OTUB1-212ENST00000543988 TUFT1Q9NNX1 390 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 BMP2KQ9NSY1 1161 aaPredicted RBP24.35■■□□□ 1.49
OTUB1-212ENST00000543988 MSRAQ9UJ68 235 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 PADI3Q9ULW8 664 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 MTMR6Q9Y217 621 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 PPME1Q9Y570 386 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 PCDHA11Q9Y5I1 949 aa24.35■■□□□ 1.49
OTUB1-212ENST00000543988 A0A087WWV3 80 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.34■■□□□ 1.49
OTUB1-212ENST00000543988 RFC5P40937 340 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 POLGP54098 1239 aaPredicted RBP24.34■■□□□ 1.49
OTUB1-212ENST00000543988 POTEGQ6S5H5 508 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 IGSF22Q8N9C0 903 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 PIGOQ8TEQ8 1089 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 SLC7A3Q8WY07 619 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 FAM161BQ96MY7 647 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 NKX2-4Q9H2Z4 354 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 LRWD1Q9UFC0 647 aa24.34■■□□□ 1.49
OTUB1-212ENST00000543988 NOC2LQ9Y3T9 749 aaKnown RBP24.34■■□□□ 1.49
OTUB1-212ENST00000543988 TMEM265A0A087WTH1 108 aa24.33■■□□□ 1.49
OTUB1-212ENST00000543988 AMHP03971 560 aa24.33■■□□□ 1.49
OTUB1-212ENST00000543988 HSP90AA1P07900 732 aaKnown RBP24.33■■□□□ 1.49
OTUB1-212ENST00000543988 GPC3P51654 580 aa24.33■■□□□ 1.49
OTUB1-212ENST00000543988 EMC2Q15006 297 aa24.33■■□□□ 1.49
OTUB1-212ENST00000543988 MYOCDQ8IZQ8 938 aa24.33■■□□□ 1.49
OTUB1-212ENST00000543988 LINC01599Q8WXQ3 324 aa24.33■■□□□ 1.49
OTUB1-212ENST00000543988 JPH2Q9BR39 696 aaPredicted RBP24.33■■□□□ 1.49
OTUB1-212ENST00000543988 ERVK-5Q9HDB9 667 aa24.33■■□□□ 1.49
OTUB1-212ENST00000543988 ANKEF1Q9NU02 776 aa24.33■■□□□ 1.49
OTUB1-212ENST00000543988 SUCLA2Q9P2R7 463 aaPredicted RBP24.33■■□□□ 1.49
OTUB1-212ENST00000543988 PP2D1A8MPX8 630 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 STX6O43752 255 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 RPS6KA5O75582 802 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 RPA1P27694 616 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 DNM2P50570 870 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 HAUS3Q68CZ6 603 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 FAM117BQ6P1L5 589 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 DTHD1Q6ZMT9 781 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 FAM228AQ86W67 206 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 SCLT1Q96NL6 688 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 TMX1Q9H3N1 280 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 MTMR10Q9NXD2 777 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 CHD9Q3L8U1 2897 aa24.32■■□□□ 1.48
OTUB1-212ENST00000543988 GJB5O95377 273 aa24.31■■□□□ 1.48
OTUB1-212ENST00000543988 CCT6AP40227 531 aaKnown RBP24.31■■□□□ 1.48
OTUB1-212ENST00000543988 RARRES1P49788 294 aa24.31■■□□□ 1.48
OTUB1-212ENST00000543988 PDIA5Q14554 519 aa24.31■■□□□ 1.48
OTUB1-212ENST00000543988 ZNF710Q8N1W2 664 aa24.31■■□□□ 1.48
OTUB1-212ENST00000543988 TMEM143Q96AN5 459 aa24.31■■□□□ 1.48
OTUB1-212ENST00000543988 CCDC43Q96MW1 224 aaKnown RBP24.31■■□□□ 1.48
OTUB1-212ENST00000543988 RAB34Q9BZG1 259 aa24.31■■□□□ 1.48
OTUB1-212ENST00000543988 SEMA6BQ9H3T3 888 aa24.31■■□□□ 1.48
OTUB1-212ENST00000543988 XPNPEP1Q9NQW7 623 aa24.31■■□□□ 1.48
OTUB1-212ENST00000543988 TLL1O43897 1013 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 SLC34A2O95436 690 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 CA3P07451 260 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 NFX1Q12986 1120 aaKnown RBP24.3■■□□□ 1.48
OTUB1-212ENST00000543988 ECM1Q16610 540 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 FAM173BQ6P4H8 233 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 EXOC8Q8IYI6 725 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 SNX29Q8TEQ0 813 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 NLRP7Q8WX94 980 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 ZBED2Q9BTP6 218 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 ZNF576Q9H609 170 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 ST3GAL5Q9UNP4 418 aa24.3■■□□□ 1.48
OTUB1-212ENST00000543988 ENPP3O14638 875 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 ARHGEF15O94989 841 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 DARSP14868 501 aaKnown RBP24.29■■□□□ 1.48
OTUB1-212ENST00000543988 EIF4BP23588 611 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms