RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 BMP2KQ9NSY1 1161 aaPredicted RBP16.85■□□□□ 0.29
CD9-210ENST00000543916 KIAA1024Q9UPX6 916 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 CDY2AQ9Y6F7 541 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 TCHHQ07283 1943 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 SPTLC2O15270 562 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 VTNP04004 478 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 ACRP10323 421 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 XRCC6P12956 609 aaKnown RBP eCLIP16.84■□□□□ 0.29
CD9-210ENST00000543916 BMP8BP34820 402 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 RFC2P35250 354 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 NUCB2P80303 420 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 GRB10Q13322 594 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 SPECC1Q5M775 1068 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 HYIQ5T013 277 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 USP49Q70CQ1 688 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 KCNK18Q7Z418 384 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 DEFB128Q7Z7B8 93 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 KRI1Q8N9T8 703 aaKnown RBP16.84■□□□□ 0.29
CD9-210ENST00000543916 UBE2OQ9C0C9 1292 aaKnown RBP16.84■□□□□ 0.29
CD9-210ENST00000543916 SUGCTQ9HAC7 445 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 DBR1Q9UK59 544 aaKnown RBP16.84■□□□□ 0.29
CD9-210ENST00000543916 PPME1Q9Y570 386 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 KDM3AQ9Y4C1 1321 aa16.84■□□□□ 0.29
CD9-210ENST00000543916 E9PMD0 336 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 PPP6R2O75170 966 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 RPLP2P05387 115 aaKnown RBP16.83■□□□□ 0.28
CD9-210ENST00000543916 RFC5P40937 340 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 POLGP54098 1239 aaPredicted RBP16.83■□□□□ 0.28
CD9-210ENST00000543916 EMC2Q15006 297 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 ZRSR1Q15695 479 aaKnown RBP16.83■□□□□ 0.28
CD9-210ENST00000543916 TMEM119Q4V9L6 283 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 NME8Q8N427 588 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 TET1Q8NFU7 2136 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 SLC7A3Q8WY07 619 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 EPSTI1Q96J88 318 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 PPP1R16BQ96T49 567 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 PLIN2Q99541 437 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.83■□□□□ 0.28
CD9-210ENST00000543916 CDHR5Q9HBB8 845 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 XPNPEP1Q9NQW7 623 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 CFAP45Q9UL16 551 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 COLQQ9Y215 455 aaPredicted RBP16.83■□□□□ 0.28
CD9-210ENST00000543916 AKT3Q9Y243 479 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 TRPV2Q9Y5S1 764 aa16.83■□□□□ 0.28
CD9-210ENST00000543916 PARNO95453 639 aaKnown RBP16.82■□□□□ 0.28
CD9-210ENST00000543916 CXCL10P02778 98 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 TMOD1P28289 359 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 UBA7P41226 1012 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 TCTN1Q2MV58 587 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 TMEM240Q5SV17 173 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 C9orf50Q5SZB4 431 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 IER5Q5VY09 327 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 ZNF365Q70YC5 407 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 LRRC15Q8TF66 581 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 SYMPKQ92797 1274 aaKnown RBP16.82■□□□□ 0.28
CD9-210ENST00000543916 CCDC43Q96MW1 224 aaKnown RBP16.82■□□□□ 0.28
CD9-210ENST00000543916 MAP7D2Q96T17 732 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 CELF4Q9BZC1 486 aaKnown RBP16.82■□□□□ 0.28
CD9-210ENST00000543916 BHMT2Q9H2M3 363 aa16.82■□□□□ 0.28
CD9-210ENST00000543916 PTPRSQ13332 1948 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 ARHGEF35A5YM69 484 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 M0QZ92 97 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 USO1O60763 962 aaKnown RBP16.81■□□□□ 0.28
CD9-210ENST00000543916 GPR32O75388 356 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 EYA4O95677 639 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 NCLP19338 710 aaKnown RBP16.81■□□□□ 0.28
CD9-210ENST00000543916 KRT85P78386 507 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 LPIN1Q14693 890 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 KARSQ15046 597 aaKnown RBP16.81■□□□□ 0.28
CD9-210ENST00000543916 SHHQ15465 462 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 RPUSD2Q8IZ73 545 aaKnown RBP16.81■□□□□ 0.28
CD9-210ENST00000543916 KCNG4Q8TDN1 519 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 TMEM143Q96AN5 459 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 CDK5RAP3Q96JB5 506 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 ZNF668Q96K58 619 aaPredicted RBP16.81■□□□□ 0.28
CD9-210ENST00000543916 MTRQ99707 1265 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 JPH2Q9BR39 696 aaPredicted RBP16.81■□□□□ 0.28
CD9-210ENST00000543916 CCSER1Q9C0I3 900 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 NT5C3AQ9H0P0 336 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 ATP6V0A4Q9HBG4 840 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 SUCLA2Q9P2R7 463 aaPredicted RBP16.81■□□□□ 0.28
CD9-210ENST00000543916 RCOR1Q9UKL0 485 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 ATP6V1DQ9Y5K8 247 aa16.81■□□□□ 0.28
CD9-210ENST00000543916 SLC26A4O43511 780 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 GAS2O43903 313 aaKnown RBP16.8■□□□□ 0.28
CD9-210ENST00000543916 CUTAO60888 179 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 DGAT1O75907 488 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 PFKMP08237 780 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 GHRP10912 638 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 PLCG1P19174 1290 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 DNM2P50570 870 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 GPC3P51654 580 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 NLRP11P59045 1033 aaKnown RBP16.8■□□□□ 0.28
CD9-210ENST00000543916 FBXO47Q5MNV8 452 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 AXDND1Q5T1B0 1012 aaPredicted RBP16.8■□□□□ 0.28
CD9-210ENST00000543916 PSRC1Q6PGN9 363 aaPredicted RBP16.8■□□□□ 0.28
CD9-210ENST00000543916 EXOC8Q8IYI6 725 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
CD9-210ENST00000543916 TMEM40Q8WWA1 233 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms