RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 PEX3P56589 373 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 KCNB1Q14721 858 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 CAPRIN2Q6IMN6 1127 aaKnown RBP14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 PIP4K2CQ8TBX8 421 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 C9orf72Q96LT7 481 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 LRRC37BQ96QE4 947 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 MAP3K14Q99558 947 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 FAM118BQ9BPY3 351 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 OSBPL1AQ9BXW6 950 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 PCDHA6Q9UN73 950 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 PCDHA8Q9Y5H6 950 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 ITIH6Q6UXX5 1313 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 TMEM94Q12767 1356 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 PODXLO00592 558 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 GYG2O15488 501 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 STAM2O75886 525 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 RAD23BP54727 409 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 PACS2Q86VP3 889 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 BBOF1Q8ND07 529 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 PYROXD1Q8WU10 500 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 ABTB1Q969K4 478 aaPredicted RBP14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 TTC1Q99614 292 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 SEPT10Q9P0V9 454 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 CCPG1Q9ULG6 757 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 ANKARQ7Z5J8 1434 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 A0A087X0T9 212 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 PNMA6FA0A0J9YX94 578 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 TRIM37O94972 964 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 FAM228BP0C875 321 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 OSTNP61366 133 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 LONRF1Q17RB8 773 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 KNOP1Q1ED39 458 aaKnown RBP14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 TRAPPC11Q7Z392 1133 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 METTL13Q8N6R0 699 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 NACC1Q96RE7 527 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 CCSER1Q9C0I3 900 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 PPARGC1AQ9UBK2 798 aaKnown RBP14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 TOM1L1O75674 476 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 RHOBTB3O94955 611 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 ZRANB2O95218 330 aaKnown RBP eCLIP14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 GALCP54803 685 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 GRAMD1BQ3KR37 738 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 EPM2AIP1Q7L775 607 aaPredicted RBP14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 RHOT2Q8IXI1 618 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 DTX3LQ8TDB6 740 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 RGL1Q9NZL6 768 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 CFAP69A5D8W1 941 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 GOLGA8RI6L899 631 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 BRDTQ58F21 947 aaPredicted RBP14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 LONP2Q86WA8 852 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 PROM2Q8N271 834 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 GIMAP8Q8ND71 665 aaPredicted RBP14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 CFAP57Q96MR6 1250 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 SLC40A1Q9NP59 571 aa14.86□□□□□ -0.03
RPS6KC1-206ENST00000543354 UBAP1LF5GYI3 381 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 GAP43P17677 238 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 DLGAP5Q15398 846 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 AOC3Q16853 763 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 RFX6Q8HWS3 928 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 DDX27Q96GQ7 796 aaKnown RBP14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 FAM84BQ96KN1 310 aaPredicted RBP14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 CSRNP1Q96S65 589 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 GJA3Q9Y6H8 435 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 MYO3AQ8NEV4 1616 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 ALKQ9UM73 1620 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 NEO1Q92859 1461 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 ERVV-1B6SEH8 477 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 CFLARO15519 480 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 KITP10721 976 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 ARHGEF16Q5VV41 709 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 LARGE2Q8N3Y3 721 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 CEP120Q8N960 986 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 NUDCD1Q96RS6 583 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 C11orf70Q9BRQ4 267 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 FGFR1OP2Q9NVK5 253 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 MRPL11Q9Y3B7 192 aaKnown RBP14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 ABCA9Q8IUA7 1624 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 NMT1P30419 496 aaKnown RBP14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 BIRC2Q13490 618 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 SPARCL1Q14515 664 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 EAPPQ56P03 285 aaPredicted RBP14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 EARS2Q5JPH6 523 aaKnown RBP14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 MYCBPAPQ8TBZ2 947 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 JDP2Q8WYK2 163 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 CEP170P1Q96L14 293 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 SMYD3Q9H7B4 428 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 BSDC1Q9NW68 430 aaPredicted RBP14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 A2ML1A8K2U0 1454 aa14.85□□□□□ -0.03
RPS6KC1-206ENST00000543354 TMEM191BP0C7N4 346 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 MX2P20592 715 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 ATP2B4P23634 1241 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 YARSP54577 528 aaKnown RBP14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 GPC5P78333 572 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 PTGISQ16647 500 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 SYCP2LQ5T4T6 812 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 WDR93Q6P2C0 686 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 TMED8Q6PL24 325 aaPredicted RBP14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 RNF207Q6ZRF8 634 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 ANKS1AQ92625 1134 aa14.84□□□□□ -0.03
RPS6KC1-206ENST00000543354 KMT5AQ9NQR1 393 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms