RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	TAF6L	Q9Y6J9	622 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	ADGRA3	Q8IWK6	1321 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	POLQ	O75417	2590 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	ESPN	B1AK53	854 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	PPP1R11	O60927	126 aa	Predicted RBP	7.42	□□□□□ -1.22
CIT-213	ENST00000543324	LRRN2	O75325	713 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	SEC24B	O95487	1268 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	PTH1R	Q03431	593 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	CDC37	Q16543	378 aa	Predicted RBP	7.42	□□□□□ -1.22
CIT-213	ENST00000543324	PTGIS	Q16647	500 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	KRTAP21-3	Q3LHN1	58 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	NAALADL2	Q58DX5	795 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	NSMF	Q6X4W1	530 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	STOX1	Q6ZVD7	989 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	IQCA1	Q86XH1	822 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	ADGRF4	Q8IZF3	695 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	CELF5	Q8N6W0	485 aa	Known RBP	7.42	□□□□□ -1.22
CIT-213	ENST00000543324	POF1B	Q8WVV4	589 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	CHMP4C	Q96CF2	233 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	MAP7D2	Q96T17	732 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	IFIH1	Q9BYX4	1025 aa	Known RBP	7.42	□□□□□ -1.22
CIT-213	ENST00000543324	KRT23	Q9C075	422 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	CPVL	Q9H3G5	476 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	GRPEL1	Q9HAV7	217 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	KCNK12	Q9HB15	430 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	TOMM22	Q9NS69	142 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	COL20A1	Q9P218	1284 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	ADD3	Q9UEY8	706 aa	Known RBP	7.42	□□□□□ -1.22
CIT-213	ENST00000543324	MAD2L2	Q9UI95	211 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	CIZ1	Q9ULV3	898 aa	Predicted RBP	7.42	□□□□□ -1.22
CIT-213	ENST00000543324	FRMPD4	Q14CM0	1322 aa		7.42	□□□□□ -1.22
CIT-213	ENST00000543324	COL6A6	A6NMZ7	2263 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.41	□□□□□ -1.22
CIT-213	ENST00000543324	PALM3	A6NDB9	673 aa	Predicted RBP	7.41	□□□□□ -1.22
CIT-213	ENST00000543324	EOMES	O95936	686 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	MMP3	P08254	477 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	GOLGA8H	P0CJ92	632 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	MTHFR	P42898	656 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	HSD17B4	P51659	736 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	ANTXR2	P58335	489 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	ITIH3	Q06033	890 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	QRICH1	Q2TAL8	776 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.41	□□□□□ -1.22
CIT-213	ENST00000543324	CES5A	Q6NT32	575 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	CCDC62	Q6P9F0	684 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	RNF207	Q6ZRF8	634 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	MB21D2	Q8IYB1	491 aa	Predicted RBP	7.41	□□□□□ -1.22
CIT-213	ENST00000543324	STAG2	Q8N3U4	1231 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	LSM14A	Q8ND56	463 aa	Known RBP	7.41	□□□□□ -1.22
CIT-213	ENST00000543324	RASGRP4	Q8TDF6	673 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	WHAMM	Q8TF30	809 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.41	□□□□□ -1.22
CIT-213	ENST00000543324	FOXQ1	Q9C009	403 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	ADAM7	Q9H2U9	754 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	JMJD4	Q9H9V9	463 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	KLK13	Q9UKR3	277 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	MTMR7	Q9Y216	660 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	ABCB11	O95342	1321 aa		7.41	□□□□□ -1.22
CIT-213	ENST00000543324	SETD2	Q9BYW2	2564 aa	Predicted RBP	7.4	□□□□□ -1.22
CIT-213	ENST00000543324	PTPDC1	A2A3K4	754 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	FAM221B	A6H8Z2	402 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324		A6NJR5	290 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	PYCARD-AS1	I3L0S3	204 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	NKRF	O15226	690 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
CIT-213	ENST00000543324	CYTH3	O43739	400 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	HYAL3	O43820	417 aa	Predicted RBP	7.4	□□□□□ -1.22
CIT-213	ENST00000543324	TRAK2	O60296	914 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	MAF	O75444	373 aa	Predicted RBP	7.4	□□□□□ -1.22
CIT-213	ENST00000543324	ARIH2	O95376	493 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	WISP1	O95388	367 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	MYL3	P08590	195 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	DDIT3	P35638	169 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	GRM4	Q14833	912 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	PLEKHG4	Q58EX7	1191 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	COLEC12	Q5KU26	742 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	TSSK4	Q6SA08	328 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	EEPD1	Q7L9B9	569 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	KLHL23	Q8NBE8	558 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	SYTL5	Q8TDW5	730 aa	Predicted RBP	7.4	□□□□□ -1.22
CIT-213	ENST00000543324	TBC1D5	Q92609	795 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	PPP1R9B	Q96SB3	815 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	MYL10	Q9BUA6	226 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	WDR11	Q9BZH6	1224 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	UBA5	Q9GZZ9	404 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	SLK	Q9H2G2	1235 aa	Predicted RBP	7.4	□□□□□ -1.22
CIT-213	ENST00000543324	RIOX1	Q9H6W3	641 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	KAT14	Q9H8E8	782 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	SENP2	Q9HC62	589 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	PRMT8	Q9NR22	394 aa	Predicted RBP	7.4	□□□□□ -1.22
CIT-213	ENST00000543324	ARHGEF3	Q9NR81	526 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	EMSY	Q7Z589	1322 aa		7.4	□□□□□ -1.22
CIT-213	ENST00000543324	LOXHD1	Q8IVV2	1947 aa		7.4	□□□□□ -1.23
CIT-213	ENST00000543324	KAT6A	Q92794	2004 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324		E7EWF7	191 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	GABBR2	O75899	941 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	PARP1	P09874	1014 aa	Known RBP	7.39	□□□□□ -1.23
CIT-213	ENST00000543324	CALML3	P27482	149 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	ARHGAP1	Q07960	439 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	SF3A2	Q15428	464 aa	Known RBP	7.39	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms