RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 GRXCR2A6NFK2 248 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 ADAMTS3O15072 1205 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 CHMP2AO43633 222 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
RTN3-212ENST00000543123 VTNP04004 478 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 COL9A1P20849 921 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 CSPP1Q1MSJ5 1256 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 MOXD1Q6UVY6 613 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 TRMT1LQ7Z2T5 733 aaKnown RBP14.8□□□□□ -0.04
RTN3-212ENST00000543123 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.8□□□□□ -0.04
RTN3-212ENST00000543123 OSMRQ99650 979 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 PLAGL2Q9UPG8 496 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 PCDHB12Q9Y5F1 795 aa14.8□□□□□ -0.04
RTN3-212ENST00000543123 CYP3A7-CYP3A51PA0A087WV96 503 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 FSD2A1L4K1 749 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 H3BQ06 376 aaPredicted RBP14.79□□□□□ -0.04
RTN3-212ENST00000543123 HOXA2O43364 376 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 IBSPP21815 317 aaPredicted RBP14.79□□□□□ -0.04
RTN3-212ENST00000543123 CYP3A7P24462 503 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 SSTR3P32745 418 aaPredicted RBP14.79□□□□□ -0.04
RTN3-212ENST00000543123 CLCN3P51790 818 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 CDC42EP1Q00587 391 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 TBC1D8BQ0IIM8 1120 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 STK3Q13188 491 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
RTN3-212ENST00000543123 SPOUT1Q5T280 376 aaKnown RBP14.79□□□□□ -0.04
RTN3-212ENST00000543123 EFCAB12Q6NXP0 572 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 MIER3Q7Z3K6 550 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 KRT25Q7Z3Z0 450 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 FAM178BQ8IXR5 827 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 TMEM40Q8WWA1 233 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 SCLT1Q96NL6 688 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
RTN3-212ENST00000543123 CDHR5Q9HBB8 845 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 ATP6V0A4Q9HBG4 840 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 TMEM161AQ9NX61 479 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 PRKAG3Q9UGI9 489 aa14.79□□□□□ -0.04
RTN3-212ENST00000543123 EVPLQ92817 2033 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 STK36Q9NRP7 1315 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 C9IYK1 514 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 GPR32O75388 356 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
RTN3-212ENST00000543123 EIF4BP23588 611 aaKnown RBP14.78□□□□□ -0.04
RTN3-212ENST00000543123 NLRP11P59045 1033 aaKnown RBP14.78□□□□□ -0.04
RTN3-212ENST00000543123 UBE3AQ05086 875 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 ANKRD1Q15327 319 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 FAM228AQ86W67 206 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 GJD3Q8N144 294 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 KLHL23Q8NBE8 558 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 NAP1L4Q99733 375 aaKnown RBP14.78□□□□□ -0.04
RTN3-212ENST00000543123 SLKQ9H2G2 1235 aaPredicted RBP14.78□□□□□ -0.04
RTN3-212ENST00000543123 UNC45AQ9H3U1 944 aa14.78□□□□□ -0.04
RTN3-212ENST00000543123 ALG13Q9NP73 1137 aaKnown RBP14.78□□□□□ -0.04
RTN3-212ENST00000543123 DDX25Q9UHL0 483 aaKnown RBP14.78□□□□□ -0.04
RTN3-212ENST00000543123 CCDC194A0A1B0GVG4 234 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 TBKBP1A7MCY6 615 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 ZNF862O60290 1169 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 MGEA5O60502 916 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 DKC1O60832 514 aaKnown RBP eCLIP14.77□□□□□ -0.05
RTN3-212ENST00000543123 PSMD10O75832 226 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 ITGB1P05556 798 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 IL9P15248 144 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 GCFC2P16383 781 aaKnown RBP14.77□□□□□ -0.05
RTN3-212ENST00000543123 DNM2P50570 870 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 ANAPC15P60006 121 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 HYAL1Q12794 435 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 CTC1Q2NKJ3 1217 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 XKR3Q5GH77 459 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 ABI1Q8IZP0 508 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 LRRC71Q8N4P6 559 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 WASF1Q92558 559 aa14.77□□□□□ -0.05
RTN3-212ENST00000543123 POP1Q99575 1024 aaKnown RBP14.77□□□□□ -0.05
RTN3-212ENST00000543123 JPH2Q9BR39 696 aaPredicted RBP14.77□□□□□ -0.05
RTN3-212ENST00000543123 SEPT9Q9UHD8 586 aaPredicted RBP14.77□□□□□ -0.05
RTN3-212ENST00000543123 KIAA1671Q9BY89 1806 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 M0R2N6 131 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 TDP2O95551 362 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 LAG3P18627 525 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 NDUFV1P49821 464 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 FAM189BP81408 668 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 UGCGQ16739 394 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 TMEM31Q5JXX7 168 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 PDE12Q6L8Q7 609 aaKnown RBP14.76□□□□□ -0.05
RTN3-212ENST00000543123 LINC01465Q8N7H1 131 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 ETNPPLQ8TBG4 499 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 SPPL3Q8TCT6 385 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 POF1BQ8WVV4 589 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 NLRP7Q8WX94 980 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 RSPH1Q8WYR4 309 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 MBOAT7Q96N66 472 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 DACT1Q9NYF0 836 aa14.76□□□□□ -0.05
RTN3-212ENST00000543123 WDR81Q562E7 1941 aa14.75□□□□□ -0.05
RTN3-212ENST00000543123 CSPG5O95196 566 aa14.75□□□□□ -0.05
RTN3-212ENST00000543123 ALADP13716 330 aa14.75□□□□□ -0.05
RTN3-212ENST00000543123 DARSP14868 501 aaKnown RBP14.75□□□□□ -0.05
RTN3-212ENST00000543123 GATMP50440 423 aa14.75□□□□□ -0.05
RTN3-212ENST00000543123 GPC3P51654 580 aa14.75□□□□□ -0.05
RTN3-212ENST00000543123 SMAD4Q13485 552 aaKnown RBP14.75□□□□□ -0.05
RTN3-212ENST00000543123 DSC3Q14574 896 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms