RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 UBA1P22314 1058 aaKnown RBP13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 SP2Q02086 613 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 PGM5Q15124 567 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 IER5LQ5T953 404 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 ARL6IP4Q66PJ3 421 aaKnown RBP13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 NEK8Q86SG6 692 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 VSIG10LQ86VR7 867 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 PPP2R3CQ969Q6 453 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 OSBPL7Q9BZF2 842 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 DDX19AQ9NUU7 478 aaKnown RBP13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 PCDHB6Q9Y5E3 794 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 ADGRA3Q8IWK6 1321 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 MYH7BA7E2Y1 1941 aa13.01□□□□□ -0.33
SRGAP1-205ENST00000542841 TRIOO75962 3097 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 TMEM221A6NGB7 291 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 M0R296 226 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 CSPG5O95196 566 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 CMA1P23946 247 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 GTF2F1P35269 517 aaKnown RBP eCLIP13□□□□□ -0.33
SRGAP1-205ENST00000542841 NDUFV1P49821 464 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 ATP2C1P98194 919 aaPredicted RBP13□□□□□ -0.33
SRGAP1-205ENST00000542841 GHRHRQ02643 423 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 ADAM15Q13444 863 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 EARS2Q5JPH6 523 aaKnown RBP13□□□□□ -0.33
SRGAP1-205ENST00000542841 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 MOXD1Q6UVY6 613 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 CCDC73Q6ZRK6 1079 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 MRPS27Q92552 414 aaKnown RBP13□□□□□ -0.33
SRGAP1-205ENST00000542841 CLP1Q92989 425 aaKnown RBP13□□□□□ -0.33
SRGAP1-205ENST00000542841 PLVAPQ9BX97 442 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 SETD4Q9NVD3 440 aa13□□□□□ -0.33
SRGAP1-205ENST00000542841 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
SRGAP1-205ENST00000542841 FAM237AA0A1B0GTK4 181 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 OPLAHO14841 1288 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 LINC01565O15544 149 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 EYA4O95677 639 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 LINC00271P0C7V0 271 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 GCFC2P16383 781 aaKnown RBP12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 CCND2P30279 289 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 PRPHP41219 470 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 BTG3Q14201 252 aaPredicted RBP12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 FAM26DQ5JW98 314 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 CAVIN1Q6NZI2 390 aaKnown RBP12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 EHMT1Q9H9B1 1298 aa12.99□□□□□ -0.33
SRGAP1-205ENST00000542841 FAM205CA6NFA0 338 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 MEIS2O14770 477 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 HOXA13P31271 388 aaPredicted RBP12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 USP11P51784 963 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 ZXDAP98168 799 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 ARHGAP4P98171 946 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 FAM160A1Q05DH4 1040 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 TCF15Q12870 199 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 INF2Q27J81 1249 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 GNPTABQ3T906 1256 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 FBXL6Q8N531 539 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 TBCKQ8TEA7 893 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 MSLNLQ96KJ4 702 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 RC3H2Q9HBD1 1191 aaKnown RBP12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 ALG13Q9NP73 1137 aaKnown RBP12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 FBXO2Q9UK22 296 aaPredicted RBP12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 ZNF215Q9UL58 517 aaPredicted RBP12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 PLAGL2Q9UPG8 496 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 TECTAO75443 2155 aa12.98□□□□□ -0.33
SRGAP1-205ENST00000542841 MYO7AQ13402 2215 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 SPDYE3A6NKU9 549 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 LOC730098B7Z3J9 87 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 ENPP3O14638 875 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 GFRA3O60609 400 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 CHRNA1P02708 482 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 GHRP10912 638 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 MARCKSP29966 332 aaPredicted RBP12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 ZNF445P59923 1031 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 COASYQ13057 564 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 PTGDRQ13258 359 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 NEDD9Q14511 834 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 NAALADL2Q58DX5 795 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 RESP18Q5W5W9 173 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 METTL7BQ6UX53 244 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 FSIP1Q8NA03 581 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 SMRP1Q8NCR6 262 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 P2RX5Q93086 422 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 ZNF689Q96CS4 500 aaPredicted RBP12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 TIGD1Q96MW7 591 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 PYM1Q9BRP8 204 aaKnown RBP12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 ANO3Q9BYT9 981 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 IRF2BPLQ9H1B7 796 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 BCAS3Q9H6U6 928 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 TMEM63CQ9P1W3 806 aa12.97□□□□□ -0.33
SRGAP1-205ENST00000542841 ATG2AQ2TAZ0 1938 aa12.96□□□□□ -0.33
SRGAP1-205ENST00000542841 NRCAMQ92823 1304 aa12.96□□□□□ -0.33
SRGAP1-205ENST00000542841 GCOM1H8Y6P7 765 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms