RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MRPL42Q9Y6G3 142 aaKnown RBP17.64■□□□□ 0.41
VPS33A-206ENST00000542310 PLXNA4Q9HCM2 1894 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 MYO7AQ13402 2215 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 DENND3A2RUS2 1198 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 TDP2O95551 362 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 XBP1P17861 261 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 KCNA5P22460 613 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 ANKRD1Q15327 319 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 KIZQ2M2Z5 673 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 TCEAL5Q5H9L2 206 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 SLC24A5Q71RS6 500 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 FAM228AQ86W67 206 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 METTL13Q8N6R0 699 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 ETNPPLQ8TBG4 499 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 NEK9Q8TD19 979 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 OSMRQ99650 979 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
VPS33A-206ENST00000542310 NRBP2Q9NSY0 501 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 ST3GAL5Q9UNP4 418 aa17.63■□□□□ 0.41
VPS33A-206ENST00000542310 C9IYK1 514 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 CHMP2AO43633 222 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 MGEA5O60502 916 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 PFKFB2O60825 505 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 VTNP04004 478 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 CLCN3P51790 818 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 UGCGQ16739 394 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 AIFM3Q96NN9 605 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 LARP6Q9BRS8 491 aaKnown RBP17.62■□□□□ 0.41
VPS33A-206ENST00000542310 PHF20Q9BVI0 1012 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 ELAC1Q9H777 363 aaKnown RBP17.62■□□□□ 0.41
VPS33A-206ENST00000542310 CDHR5Q9HBB8 845 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 PCDHB7Q9Y5E2 793 aa17.62■□□□□ 0.41
VPS33A-206ENST00000542310 ARID2Q68CP9 1835 aa17.61■□□□□ 0.41
VPS33A-206ENST00000542310 GRM6O15303 877 aa17.61■□□□□ 0.41
VPS33A-206ENST00000542310 GCFC2P16383 781 aaKnown RBP17.61■□□□□ 0.41
VPS33A-206ENST00000542310 TARBP2Q15633 366 aaKnown RBP17.61■□□□□ 0.41
VPS33A-206ENST00000542310 EFCAB12Q6NXP0 572 aa17.61■□□□□ 0.41
VPS33A-206ENST00000542310 MIER3Q7Z3K6 550 aa17.61■□□□□ 0.41
VPS33A-206ENST00000542310 NAP1L4Q99733 375 aaKnown RBP17.61■□□□□ 0.41
VPS33A-206ENST00000542310 ADAM2Q99965 735 aa17.61■□□□□ 0.41
VPS33A-206ENST00000542310 DDX25Q9UHL0 483 aaKnown RBP17.61■□□□□ 0.41
VPS33A-206ENST00000542310 TPCN1Q9ULQ1 816 aa17.61■□□□□ 0.41
VPS33A-206ENST00000542310 AKT3Q9Y243 479 aa17.61■□□□□ 0.41
VPS33A-206ENST00000542310 CCDC194A0A1B0GVG4 234 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 TBC1D8BQ0IIM8 1120 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 DSC3Q14574 896 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 PAN2Q504Q3 1202 aaKnown RBP17.6■□□□□ 0.41
VPS33A-206ENST00000542310 XKR3Q5GH77 459 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 PPP4R3AQ6IN85 833 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 NEK8Q86SG6 692 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.6■□□□□ 0.41
VPS33A-206ENST00000542310 WASF1Q92558 559 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 PPP2R3CQ969Q6 453 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 NIFKQ9BYG3 293 aaKnown RBP17.6■□□□□ 0.41
VPS33A-206ENST00000542310 ADAMTS10Q9H324 1103 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 TMEM161AQ9NX61 479 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 PLAGL2Q9UPG8 496 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 FAM50BQ9Y247 325 aa17.6■□□□□ 0.41
VPS33A-206ENST00000542310 HOXA2O43364 376 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 EIF4BP23588 611 aaKnown RBP17.59■□□□□ 0.41
VPS33A-206ENST00000542310 GPC3P51654 580 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 NLRP11P59045 1033 aaKnown RBP17.59■□□□□ 0.41
VPS33A-206ENST00000542310 FAM189BP81408 668 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 CDC42EP1Q00587 391 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 PPP2R5CQ13362 524 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 CSPP1Q1MSJ5 1256 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 INF2Q27J81 1249 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 CTC1Q2NKJ3 1217 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 PTCRAQ6ISU1 281 aaPredicted RBP17.59■□□□□ 0.41
VPS33A-206ENST00000542310 TRMT1LQ7Z2T5 733 aaKnown RBP17.59■□□□□ 0.41
VPS33A-206ENST00000542310 LRRC71Q8N4P6 559 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 FAM20AQ96MK3 541 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 PPP1R16BQ96T49 567 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 C1QTNF1Q9BXJ1 281 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 AAASQ9NRG9 546 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 SEPT9Q9UHD8 586 aaPredicted RBP17.59■□□□□ 0.41
VPS33A-206ENST00000542310 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
VPS33A-206ENST00000542310 GRXCR2A6NFK2 248 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 TBX3O15119 743 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 SLC37A4O43826 429 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 ITGB1P05556 798 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 AK2P54819 239 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 UBE3AQ05086 875 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 LETM2Q2VYF4 491 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 GJA10Q969M2 543 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 ATP6V0A4Q9HBG4 840 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 KCNMB3Q9NPA1 279 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 CLDND1Q9NY35 253 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 PPME1Q9Y570 386 aa17.58■□□□□ 0.4
VPS33A-206ENST00000542310 IGKV6-21A0A0C4DH24 114 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 DKC1O60832 514 aaKnown RBP eCLIP17.57■□□□□ 0.4
VPS33A-206ENST00000542310 STBD1O95210 358 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 DARSP14868 501 aaKnown RBP17.57■□□□□ 0.4
VPS33A-206ENST00000542310 GATMP50440 423 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 PSMC5P62195 406 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 HYAL1Q12794 435 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 CAMK1Q14012 370 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 FAM178BQ8IXR5 827 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 KLHL23Q8NBE8 558 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 SPPL3Q8TCT6 385 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms