RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GGT7Q9UJ14 662 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 NRXN3Q9Y4C0 1643 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 CYP11B2P19099 503 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 GALCP54803 685 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 MTMR1Q13613 665 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 MTMR3Q13615 1198 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 RPUSD2Q8IZ73 545 aaKnown RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 ACCSQ96QU6 501 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 FAM213AQ9BRX8 229 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 INTS9Q9NV88 658 aaKnown RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 TTC7AQ9ULT0 858 aaPredicted RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 PLAGL2Q9UPG8 496 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 NOC2LQ9Y3T9 749 aaKnown RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 HIP1RO75146 1068 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 PPP4CP60510 307 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 MAGOHP61326 146 aaKnown RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 PLA2G4FQ68DD2 849 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 MTMR8Q96EF0 704 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 PRMT6Q96LA8 375 aaPredicted RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 CEP63Q96MT8 703 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 MED15Q96RN5 788 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 STMN4Q9H169 189 aaPredicted RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 PLCB1Q9NQ66 1216 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 TRPC6Q9Y210 931 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
VARS2-212ENST00000542001 POLD1P28340 1107 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 KCNJ1P48048 391 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 SLC18A3Q16572 532 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 PPP1R18Q6NYC8 613 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 EMBQ6PCB8 327 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 TCP11Q8WWU5 503 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 AGBL1Q96MI9 1066 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 RUSC1Q9BVN2 902 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 MAK16Q9BXY0 300 aaKnown RBP17.41■□□□□ 0.38
VARS2-212ENST00000542001 IKZF4Q9H2S9 585 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 L1RE1Q9UN81 338 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 FER1L4A9Z1Z3 1794 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 NFAT5O94916 1531 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 INO80B-WBP1J3KQ70 363 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 EVI5O60447 810 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 ZBTB7AO95365 584 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 KCNA1Q09470 495 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 FUT2Q10981 343 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 LRRC14Q15048 493 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 SMAD1Q15797 465 aaKnown RBP17.41■□□□□ 0.38
VARS2-212ENST00000542001 FAM133BQ5BKY9 247 aaKnown RBP17.41■□□□□ 0.38
VARS2-212ENST00000542001 NT5DC1Q5TFE4 455 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 GADL1Q6ZQY3 521 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 INO80BQ9C086 356 aaPredicted RBP17.41■□□□□ 0.38
VARS2-212ENST00000542001 PRELPP51888 382 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 AP3B2Q13367 1082 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 GKAP1Q5VSY0 366 aaPredicted RBP17.41■□□□□ 0.38
VARS2-212ENST00000542001 ZNF384Q8TF68 577 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 DCAF4Q8WV16 495 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 PNMA5Q96PV4 448 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 FBXL5Q9UKA1 691 aa17.41■□□□□ 0.38
VARS2-212ENST00000542001 SYNJ2BP-COX16A0A087WUM0 186 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 CYP26A1O43174 497 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 PPFIA4O75335 1185 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 CEP55Q53EZ4 464 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 SLC10A5Q5PT55 438 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 INTS8Q75QN2 995 aaKnown RBP17.4■□□□□ 0.38
VARS2-212ENST00000542001 C1orf54Q8WWF1 131 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 EHD4Q9H223 541 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 COX16Q9P0S2 106 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 ANAPC7Q9UJX3 599 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 USP20Q9Y2K6 914 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 FAM169AQ9Y6X4 670 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 WDR91A4D1P6 747 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 HPCAL4Q9UM19 191 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 FRMD3A2A2Y4 597 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 DENND3A2RUS2 1198 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 RAD51CO43502 376 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 HDLBPQ00341 1268 aaKnown RBP17.4■□□□□ 0.38
VARS2-212ENST00000542001 MKRN3Q13064 507 aaKnown RBP17.4■□□□□ 0.38
VARS2-212ENST00000542001 RC3H1Q5TC82 1133 aaKnown RBP17.4■□□□□ 0.38
VARS2-212ENST00000542001 FAM20AQ96MK3 541 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 GPRC5CQ9NQ84 441 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 KLHL11Q9NVR0 708 aa17.4■□□□□ 0.38
VARS2-212ENST00000542001 TMEM150BA6NC51 233 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 PDE2AO00408 941 aaPredicted RBP17.39■□□□□ 0.37
VARS2-212ENST00000542001 PSMD14O00487 310 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 MFAP3P55082 362 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 CCDC93Q567U6 631 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 SH3RF1Q7Z6J0 888 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 THNSL1Q8IYQ7 743 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 NAA25Q14CX7 972 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 FOXR1Q6PIV2 292 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 ARL8AQ96BM9 186 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 C11orf70Q9BRQ4 267 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 INTS2Q9H0H0 1204 aaKnown RBP17.39■□□□□ 0.37
VARS2-212ENST00000542001 BLOC1S4Q9NUP1 217 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 EZRP15311 586 aaKnown RBP17.39■□□□□ 0.37
VARS2-212ENST00000542001 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
VARS2-212ENST00000542001 COG2Q14746 738 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 VPS72Q15906 364 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 RSRC2Q7L4I2 434 aaKnown RBP17.39■□□□□ 0.37
VARS2-212ENST00000542001 CCDC13Q8IYE1 715 aa17.39■□□□□ 0.37
VARS2-212ENST00000542001 RNF25Q96BH1 459 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms